| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1757 |
|---|
| Symbol | |
|---|
| ID | 5455246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1909331 |
|---|
| End bp | 1910506 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640877338 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001413033 |
|---|
| Protein GI | 154252209 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.439431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.143058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATCA ACGGAAAATC CTACATAGTC GGCATCTACG AGCATCCGTG CCGCGCGGCG
CTGGACAAGA CGCTGCCGCA ACTTCACGCC GAGATCGCGA AGGGTGCGCT GGCGGACGCT
GGTCTTTCAA AGGACGATGT TGACGCATAT TTCTGCGCCG GCGACGCACC GGGGTTGGGC
CCGATCAACA TGATCGAATA TATGGGCCTC AACAATGTGC GTCATATGGA CAGCACGGAG
ACCGGCGGGT CTTCCTACAT CGTCCATGTC AATCACGCAG CGCAGGCCAT AGCCGCGGGG
CATTGCAATG TGGCGCTGAT CACGCTGGCA GGCAGGCCGG TTGCCGACGC GAAAGAAGGT
AAGCCCGTCC GTTACTACAA CCAGCAAGCG CCGGACTTTC CGTTCGAAAT GCCCTATGGC
CCCAACGTCA CGAATATGTA CGCCATGTGT GCGATGCGGC ATATGTACGA ATACGGCACC
ACCAGCGAGC AACTCGCATG GATCAAGGTC GCCGCATCCC ATCACGCCCA GCACAATGAA
CATGCCAGGC TCCGCGACGT TGTGACCGTG GAGGATGTCG TCAATTCGCC GATGATTGCC
GATCCGTTGC ACCGGCTCGA CTGTTGCGTC ATTACCGACG GTGGTGGCGG CATTGTGATG
GTGAGCCCGG AAGTGGCGAA GTCGCTGAAG CGTACCCGCG TCAAGGTTCT CGGTGCCGGT
GAGGCGCCCA AGCATCTCGC GGCGGGCCAG GTCGATCTGA CCTATTCCGG CGCGCGTTGG
AGCGGACCCA AAGCGTTCGC TGAAGCCGGC GTCACGCCCG CCGATATTAA ATACGCCTCC
GTCTATGATT CCTTCACTAT TACAGTGCTG GAAACGCTCG AAGATCTGGG TTTTTGCAAA
AAAGGTGAGG GCGGGAAGTT CGTCTCGGAC GGCAATCTGA TTTCCGGCGT CGGCAAATTG
CCCTTCAACA CGGATGGCGG GGGATTGTGC AACAACCACC CGGGCAATCG CGGCGGCATG
ACCAAGGTTC TCGAAGCGGT TCGTCAGGTT CGCGGTGAGG CTCATCCGAA GGTTCAGGTT
CGCAATTGCG ATATTGCTCT CGCGCATGGA ACCGGCGGGC TTCTGGGATC GCGTATGGGC
AGCGCAACCG TTATTCTGGG GAACGAAGAC GCATGA
|
|---|
| Protein sequence | MGINGKSYIV GIYEHPCRAA LDKTLPQLHA EIAKGALADA GLSKDDVDAY FCAGDAPGLG
PINMIEYMGL NNVRHMDSTE TGGSSYIVHV NHAAQAIAAG HCNVALITLA GRPVADAKEG
KPVRYYNQQA PDFPFEMPYG PNVTNMYAMC AMRHMYEYGT TSEQLAWIKV AASHHAQHNE
HARLRDVVTV EDVVNSPMIA DPLHRLDCCV ITDGGGGIVM VSPEVAKSLK RTRVKVLGAG
EAPKHLAAGQ VDLTYSGARW SGPKAFAEAG VTPADIKYAS VYDSFTITVL ETLEDLGFCK
KGEGGKFVSD GNLISGVGKL PFNTDGGGLC NNHPGNRGGM TKVLEAVRQV RGEAHPKVQV
RNCDIALAHG TGGLLGSRMG SATVILGNED A
|
|---|
| |