| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1754 |
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| Symbol | |
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| ID | 5455894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1898625 |
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| End bp | 1900334 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877329 |
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| Product | peptidase M23B |
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| Protein accession | YP_001413030 |
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| Protein GI | 154252206 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.598264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACGACA CGGGGACCCA GGTGACAGAC GAACATAACG GCAAGGGCAC GATCGACGGG
GACGTGCCTG CTACCTTCTG GCGGCGCGCG CAGCGCAATG CTCAATTCTC CTTCAAACTC
TATACATCGG CGAGCCGGCT GGCGCTTGGT CAGTCGCGCT GGATCGCGGC GTCATGTGTC
CTTGGCGCGA TGTCGCTTGG CCTTGTCGGT CTTGGCGTCG CATCGCTGGT CGCCCCTTAT
GAAGGCGTGG CAACGGCGGC GCTGACGGCG GAGCGCGCAC CGCGCGTCGT CGCCTGGGAC
GCCTCGCCTG CCCAGATGGC GGAACGCACG GAAACCCGCG CGCTGCAGGA AACCGCAGCC
CTTCTGCCCA CGGATGATCT GCTGGCGGCG GCGGAAACGG AAACGGCGGC AGCAACGGCC
GAGCAGGAGC TCGCGGCCGT CTCTCTCGCC GATCCCGGCC TCTTCCTGCC GCAGACGGAA
GAAAGCCTCG CCGCGGAAGC CGCATCGCTT CCCGCCGCGC CGCTCGAACC GCGCGCAACG
GAAACCACCG TCTCCCTCGC CAATGGCGAG ACGCTGATGG AAGTGCTGCA GAACGCCGGC
GTCGATCGCA TCGACGCCTA TCACGCGGTC GCGGCCATGA CGTCTTACTA CAGCCCGCGC
AAACTCCGCG CCGGCCAGGA GATTTCTCTC GCCTTCATGG AAATGCCGGA TGGCATGATC
GGCGAGGAAG GCGAAACGCC GGCGAAATAC CTGACCGCCA TTTCACTGCA GCCCGACATC
GAACGCGCGA TCGAAGTAAC GCGCAACGAA GACGGCAGCT TCGGCGGCCG CGAAACCATT
CGCGAATTCA CGGAAGGCTT CGTGCGCGCT TCCGGCACCA TCAACAATTC TCTCTTCCTC
GACGCGGAAC AGGCGGGCAT CCCGCCGCAG ATCATCATTG AAATGATCCG CATGTACTCC
TACAGCGTCG ACTTCCAGCG CGAAATCCAG CCTGGCGACA AGTTCGAAGT CTATTTCAGC
CGCAAATTCG ACGAGATGCA GCTCCCCGTG AAAGAGGGCG ACGTCCTCCA CGCATCGCTC
ACCGTCGGCG GCAAGACGCA CAAGCTCTGG CGTTTCGATC CCGGCAAGGA TGGCGAGTGG
GACTATTTCG ACGAGTCCGG CCAGAGCATG AAGAAGTTCC TGATGAAGAC GCCGATCGAC
GGTGCGCGTC TTTCCTCCGG CTACGGATTG CGCAAGCATC CGATCCTCGG CTACTCGAAG
ATGCATGCGG GCGTAGACTT CGCCGCGCCC CGCGGTACGC CGATCTACGC CGCCGGCGAC
GGCACGGTGA CACGCGCGAA CCGCTTCGGC AGCTTCGGCA ACTACATCTC CATCCGCCAC
GCAAATGGCT ATGAAACCGC TTACGCGCAT CTCAACGGCT TCGCGCGCGG CGTCAGGGCG
GGCACGCGCG TCCGTCAGGG CCAGGTGATC GGTTATGTCG GCACAACCGG CCGCTCGACC
GGCCCGCATC TTCACTACGA AGTGCATGTG AACGGCAAGA AGATGAACCC GCTCGCGCTG
AAAGTGCCGA CAGGCCGCAA GCTCGAGGGC AATCAGCTCG CCGCCTTCAA GAACCTGCGC
GCCGACATCG CGACGCAAAT GGCCGAAGCG CCGCTTGCAA CGAAGGTGGC CGCGGCGGGC
GCGAAGGACG ATACGCGCAC CGCCAACTGA
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| Protein sequence | MYDTGTQVTD EHNGKGTIDG DVPATFWRRA QRNAQFSFKL YTSASRLALG QSRWIAASCV
LGAMSLGLVG LGVASLVAPY EGVATAALTA ERAPRVVAWD ASPAQMAERT ETRALQETAA
LLPTDDLLAA AETETAAATA EQELAAVSLA DPGLFLPQTE ESLAAEAASL PAAPLEPRAT
ETTVSLANGE TLMEVLQNAG VDRIDAYHAV AAMTSYYSPR KLRAGQEISL AFMEMPDGMI
GEEGETPAKY LTAISLQPDI ERAIEVTRNE DGSFGGRETI REFTEGFVRA SGTINNSLFL
DAEQAGIPPQ IIIEMIRMYS YSVDFQREIQ PGDKFEVYFS RKFDEMQLPV KEGDVLHASL
TVGGKTHKLW RFDPGKDGEW DYFDESGQSM KKFLMKTPID GARLSSGYGL RKHPILGYSK
MHAGVDFAAP RGTPIYAAGD GTVTRANRFG SFGNYISIRH ANGYETAYAH LNGFARGVRA
GTRVRQGQVI GYVGTTGRST GPHLHYEVHV NGKKMNPLAL KVPTGRKLEG NQLAAFKNLR
ADIATQMAEA PLATKVAAAG AKDDTRTAN
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