| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1746 |
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| Symbol | ispG |
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| ID | 5454872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1888993 |
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| End bp | 1890144 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877321 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001413022 |
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| Protein GI | 154252198 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.91889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA GCATCAGACC CTGGCGCGAC ATCATGCGCA GACCGAGCCG GCAGATCCAT
GTGGGGTCCG TTGCCGTGGG CGGCGATGCG CCGATTTCCG TCCAGACGAT GACGAACACG
CTCACCTCGG ATGCGAAAGC CACCATCGAG CAGATCAGGC GCATCGAGGA GGCAGGCTGC
GACATCGTCC GCGTTTCCTG TCCCGATGAA GATTCGACAA GGGCGCTGAA GGAAATCGTC
CGCGAGACGA AGATCCCGAT CGTCGCCGAC ATCCATTTCC ACTACCGCCG CGCCATTGAG
GCGGCGGAGG CGGGGGCAGC GTGCCTCCGC ATCAATCCGG GCAATATCGG CTCGGCGGCG
CGGGTGAAGG AAGTCGTGCA GGCCGCGAAG GATCATGGCG TCTCGATGCG GATCGGCGTC
AATGCCGGGT CGCTCGAGCG CGATCTTCTG GAAAAATATG GCGAGCCCTG CCCGGAAGCG
ATGGTTGAAA GCGCGCTCGA TCACGCACGT ATTCTGCAGG ATCACGATTT CCACGAATTC
AAGATCAGCG TGAAGGCGTC CGACCCCTTC CTCACCGTCG CCGCCTATCA GCAGCTTGCC
GATGCCATCG ACTGCCCGCT CCATATCGGC GTGACGGAGG CCGGCGGCCT GATGACCGGC
ACGATCAAAT CCTCCATCGG CCTCGGCATG CTGCTCTGGG GCGGCATCGG CGACACGATC
CGCGTCTCCC TCTCCGCCGA TCCGGTGGAA GAGGTGAAAG TGGGCTTCGA CATATTGAAG
TCGCTCAACC TGCGCCATCG CGGCGTCACC ATCATTTCCT GCCCGTCCTG CGCGCGTCAG
GGCTTCAATG TCATCGAGAC GGTAAAGATC CTCGAAGACC GTCTCGCGCA TATCTCCACG
CCGCTCACGC TTTCGGTCAT CGGTTGCGTC GTCAATGGTC CGGGCGAGGC GGAGCAGACG
GATATCGGCT TCACCGGCGG CGGCGCCGGT TCCGGCATGG TCTATCTCGC CGGTCTCACC
GATCACAAGA TAAAGAACGA GGAGATCGTC GAGCATCTCG TATCGCTCGT CGAAGAGAAG
GCCAGGGAAA TCGAAGCGGC GAAGGAAGCC GCCGAAGCTG CGCTTGAGCC GCGCGCGCTT
GCCGGGGATT AG
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| Protein sequence | MSSSIRPWRD IMRRPSRQIH VGSVAVGGDA PISVQTMTNT LTSDAKATIE QIRRIEEAGC
DIVRVSCPDE DSTRALKEIV RETKIPIVAD IHFHYRRAIE AAEAGAACLR INPGNIGSAA
RVKEVVQAAK DHGVSMRIGV NAGSLERDLL EKYGEPCPEA MVESALDHAR ILQDHDFHEF
KISVKASDPF LTVAAYQQLA DAIDCPLHIG VTEAGGLMTG TIKSSIGLGM LLWGGIGDTI
RVSLSADPVE EVKVGFDILK SLNLRHRGVT IISCPSCARQ GFNVIETVKI LEDRLAHIST
PLTLSVIGCV VNGPGEAEQT DIGFTGGGAG SGMVYLAGLT DHKIKNEEIV EHLVSLVEEK
AREIEAAKEA AEAALEPRAL AGD
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