Gene Plav_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1745 
Symbol 
ID5453430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1887699 
End bp1888823 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID640877320 
Producthypothetical protein 
Protein accessionYP_001413021 
Protein GI154252197 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.934061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG TCACTATGCT GCCGACCGGA AACGATGGGT CGGAGCCTCG TCGGCGGCTG 
CATCTGCGCG ACATCACCAA CGAAGTTTCC GTCGAGGCGG AGTCTGTCGG CGCGGATTTG
CGCGCGGCGC GGCTGCGCCG GGGCGACGAT ATCCGCAGCA TCGCGCAGGC ATTGCGCATC
CGCCGCGACC AGATCGAAGC GCTTGAGGAG GGCCGCCACG ACGAGTTGCC CGCTCGCGCC
TATGCCGTCG GTTTCGTTCG TTCCTATGCG GAATATCTTG GCCTCGACAG CCGGCATATC
GTCCAGCGGT ACAAGGACGA GCTTGATGGC CGCGCCGCCG CTGCCGCCGA ACTCCACTTT
CCGGATGCCG CCGAGGCGCG CCGCCTGCCC AAGGGTACGG CCCTCATCGT GGCGCTCGTC
GTTGCATCGG GCATCTATGG CGGCTGGCTG CTTACCAAGT CCACCGACGA GATGATGACG
ACGCGGACCG CGGCAACTGC GCCCGCGGTC GCTCCCATCG TCGAAGAGGT GAAGTCGCCC
GGTACGCGCG GCGATAGTGC TTCCGCCGCG ACGCCGAGGG CCGATGCCGT TCCCGTCGTT
CGTGTGCCGG GGCTTGCGCC GGTGGCGACG GCGGAACAGA ACATGTCGAC CCCGCAATCG
CTGTATGATC CCGCGCCCGC GCCGGCCACG GTCGATGCGG AGGGCCTGCC GCTCGAGGAT
AGCGGCGAGG TCGAGATGGC CGCGCTGGAA GAGAGCGCCG CTGTCGAATT GCCGCCGCTG
CCCGAAGGCA CGCCTTACGG CGCCGAGAAT GTGGATGGCC GTGTCGTCGT CCGCGCCCGC
CGGGACGGCG CCTGGCTTCG CATCGAAGAC GGCACAGGCC AGGTTCTTAT CGAGCAGACC
TTCAAGGCGG GCGACAGCTA CCGCGCGCCT TCGCGTCCGG GCGTCATTCT CGTCGCGCGC
GATGCCAGCG CCTTCGAGAT CATGGTCGAT GGCCAGTCCC TCGGCCTTGC TGGCCCGCCC
ACGCTGGTCC TGACCGGCAA ATCGCTGGAT CACGCCGATC TGGTGGCCGC CATGCCGAAA
CCGGCGGAAG CAGGCCTGCA GGGCGAAAAC GTCGCAGTCG AATAA
 
Protein sequence
MNKVTMLPTG NDGSEPRRRL HLRDITNEVS VEAESVGADL RAARLRRGDD IRSIAQALRI 
RRDQIEALEE GRHDELPARA YAVGFVRSYA EYLGLDSRHI VQRYKDELDG RAAAAAELHF
PDAAEARRLP KGTALIVALV VASGIYGGWL LTKSTDEMMT TRTAATAPAV APIVEEVKSP
GTRGDSASAA TPRADAVPVV RVPGLAPVAT AEQNMSTPQS LYDPAPAPAT VDAEGLPLED
SGEVEMAALE ESAAVELPPL PEGTPYGAEN VDGRVVVRAR RDGAWLRIED GTGQVLIEQT
FKAGDSYRAP SRPGVILVAR DASAFEIMVD GQSLGLAGPP TLVLTGKSLD HADLVAAMPK
PAEAGLQGEN VAVE