| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1710 |
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| Symbol | |
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| ID | 5453404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1849833 |
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| End bp | 1851014 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877285 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001412986 |
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| Protein GI | 154252162 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.69138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.65846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCAC TTGTTTCCCT CTCGCCTATC CAGCCACGCC ACAAGCGAAG CCTCGGGGCA
GCCATCATTT CAATGGGGAT GGTCAACCTG TCGATGGGCA TCGCCTTTCC GCTGACAGCG
CTCATTCTGG CGCGGCAGGG CGTCGAACCC GGCATGATCG GCCTTTCCAC CGCCGCGCAG
GCCGCACCCG TTTTTCTGAT TTCGCCTTTC GCGCCGCGCA TCATGCGCCA TTTCGGCCCC
GCCAATGTGA TGATGGCGGG CCTGCTGCTG GCCGGCGTCT CGTTCGCCTT GATGGGCCTC
TACGCCAATC TTCTCGCCTG GTTTCCTCTT CGCTTCCTGC TGGGCTCCGC CGGAACGCTT
CTCTGGGCGA CCAGCGAGGC ATGGATAAAT TCCCTCGCCA GCGAAGAACG CCGAGGCCGC
ATCATCGGGC TTTACGGCGC CGCCGCAGCC GCGGGCTTTG CCCTCGGACC GACAACGCTC
GTGCTGGTCG GGACCGATGT CGCGCCCTTC TTCATCGGTG CAGGGCTGAT GATTGCCGCC
GCCGCCATCG TCGCGACCGC CGATAGAAGC CGGAATCATT TTGAAGCAAC GGACAAGCCT
TCTGCGATGT GGCGTCTCCT GCTGATCGCG CCCGCTGCCT TGCTGGTGAA TTTCTTTTTT
GCGGCGGCCG AAGAGTCGCT CGTCACCTTC TTCCCGCTCT ACGCCATCCG GTCCGGCATG
GCGGAAGAAG CAAGCCTCGT CCTTCTGACC GTCGCGGCGC TGGGCGCAAT CGTTATGCAG
CCGCTCATCG GGGCCGTCGC CGACAGGATC AATCGTCTGA ACCTGATGAT CGGTCTCGTG
ATTGCCACGC TGGCCGGCTA TCTCATCCTG CCCTTCGCCC TGCCCGGCTT TGTCGCGACC
GCCATCGCGC TTTTCGTCGT GGTCGGCTTT GCGAATGGCA TCTTCACACT TGGCATGGTG
CTGGTCGGCG AACGCTTTCG CGGCTCGGAG CTCGCAGGCG CAAGCGCCTT TACGACCGCC
ATGTGGGGCA CGGGCGCGCT TGTCGGCGCC CCTCTTTCCG GCGCTGCCAT GCAGCTATGG
GACCCGCATG GCCTGATTGC GGCGATACTG CTGATCTTTC TTGCCTATCT GCCCTTTCCC
ATCGTGGCGC GCCTGCGCGC GAGAAAATAC AACGTGGACT GA
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| Protein sequence | MSPLVSLSPI QPRHKRSLGA AIISMGMVNL SMGIAFPLTA LILARQGVEP GMIGLSTAAQ
AAPVFLISPF APRIMRHFGP ANVMMAGLLL AGVSFALMGL YANLLAWFPL RFLLGSAGTL
LWATSEAWIN SLASEERRGR IIGLYGAAAA AGFALGPTTL VLVGTDVAPF FIGAGLMIAA
AAIVATADRS RNHFEATDKP SAMWRLLLIA PAALLVNFFF AAAEESLVTF FPLYAIRSGM
AEEASLVLLT VAALGAIVMQ PLIGAVADRI NRLNLMIGLV IATLAGYLIL PFALPGFVAT
AIALFVVVGF ANGIFTLGMV LVGERFRGSE LAGASAFTTA MWGTGALVGA PLSGAAMQLW
DPHGLIAAIL LIFLAYLPFP IVARLRARKY NVD
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