| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1698 |
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| Symbol | |
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| ID | 5456469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1832970 |
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| End bp | 1835963 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877273 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001412974 |
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| Protein GI | 154252150 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.282917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCG CGTCCCTCCA GACTGTCATC GGCCGCGCAC GCGACGGCCT AGCCGAACGC
CGCCGCGTAA CCGCGGTGCT TGGCCCCACG AACACCGGGA AGACTCATCT CGCCATCGAA
CGAATGATGG CGCACCGGAC CGGCATGATC GGCCTGCCAT TGCGCCTGCT CGCGCGCGAG
GTCTATGACC GCGTCGTCAA GGCAAAGGGT GCCCGGGAGG TCGCGCTCAT TACCGGCGAG
GAAAAGATAC TCCCCCCCAC CGCGCGCTAT TACGTTTGCA CCGTCGAGGC GATGCCGCTC
GATCTCGAGG TCGACTTTCT GGCAATCGAC GAAATCCAGC TCGCGGCCGA CCGCGAGCGC
GGCCACACAT TTACCGACCG GCTGCTCCGC GCCCGCGGTC ATTCCGAAAC GATGATGCTC
GGCTCGGAAA CCGTGAGAGG ACTGATCCAG AAGCTTCTTC CCGATACGCT GTTCATCAGC
CGCCCGCGTT TTTCCGAGCT GTCCTGGACG GGCTCGAAGA AGATCACACG ATTGCCCCGC
CGGTCGGCCA TCGTGGCTTT CTCCGCGGAT CAGGTTTATG CAATTGCCGA ACTTATCCGC
CGTCAGCGGG GCGGCGCTGC CGTCGTCATG GGTGCATTGA GCCCCCGCAC CCGCAACGCG
CAGGTTGCGC TCTATCAATC GGGCGATGTC GATTTCCTCG TAGCCACCGA CGCCATCGGC
ATGGGCTTGA ACATGGATGT CGACCACGTG GCCTTCGCGT CGACGGAAAA ATTCGACGGG
CGCCTGCACC GGCCGCTGCA TGTCGCCGAA CTGGCCCAGA TCGCCGGGCG CGCGGGCCGC
CACATGAACA ACGGCACTTT CGGCGTGACG GGCGAGGCTG GACCGCTATC CGACGAAATC
GTTTCACGGA TCGAAAACCA TCAGTTCGAA CCGGAGCGAG TATTTCAGTG GCGAAATCCG
CACCTGGAAT TTGGCAGCGT CGCGGCTCTG ATGCGCAGCC TCGAAATGCC GCCAGGAAGA
CCGGGGCTGG CGCGCGCCCC GATAGCCAAC GATCTGGAGG CACTGACGCG CATGAGCCGC
GATCAGGATG TTCAGAATCT GGCCCGCTCG CCCGCCGCCA TCCGCCGCCT GTGGGAGGTT
GCGCAGGTCC CGGACTTCCG GAAGACGCTG GCAAGCGAAC ATGCGACCCT TCTGACGCGG
CTCTATCTTT TCCTTATGGA ACCCGGGGGC GGAACCGAAG CGCGCATCCC GGACGACTGG
CTCGACCGTC AGATGAAAAC GCTGGAGCGC ACCGATGGCG ACATCGACAT GCTTTCGGCC
CGCCTCGCTC ACATCCGGAC TTGGACCTAT GTGGCGAACC GCGCCGATTG GCTGCACAAT
CCTGTGCATT GGCAGGAGCG CACGCGTACG ATAGAGGATA GGCTGTCTGA CGCTCTGCAC
GAGCGATTGA CGCAGCGGTT CATCGACCGG CGCACAAGCG TATTGATGAA ACGGCTGCGC
CAGAACGAGG ATCTTATGGC GGCAGTGAAC GGTGACGGCG AAGTATTGGT AGAAGGCGAG
TATGTAGGAC GCCTTCAGGG ATTTGTATTC GTGCCCGATC CACGGGCCGA GGGAGAACAG
GGCCGTGTGC TGCGCGCTGC GGCAAATCAG GCACTGACGG GCGAAATCGC CGACCGGGCA
CAAAGGCTGA CGGTTGCGCC GGATGCCGAA ATCACCCTTT CCGAGCATGG CCGCATCCTC
TGGGCCGGCC ATCCAGTCGC CGAACTGAAA AGCGGGGATG CGCCCCTTGC ACCGCGCGTA
GAACTTGTCG CGGGCGAAGA ACTGAACGGT CCCGCCCGGG AAAGCGTGCA GACGCGCCTG
GAAGCCTGGC TCAAGATGCA TATAACCAAC GTGCTGGCGC CGCTGGTCTC GCTGCGCGAC
GCCACCGATG TGGAAGGCCT CGCACGTGGC ATCGCATTCC GCCTCGTTGA GAACCTTGGC
TCTGTGAAGC GCGATCAGGT GGCGGAGGAT GTCCGTCTGC TGGACCAGGC CGCGCGCGGC
CAGCTGCGCA AGCATGGGGT TCGCTTCGGC GCTTATTCCG TATTCATGCC CGCCCTGCTG
AAGCCGGCGC CGGCGCGATT GCTTCTGACG CTGTGGTCCC TGACGCGCAA GGATCTGGAC
GATCCCTTCT CGGGGCTTCC CCCTTCGCCG GCGCCCGGCC TTACCTCGGT GCCTGCCGAC
ACGGCAGCGC CGCAAGGCTT CTACGAAGCT CTCGGCTTTC GCGTCTGCGG CACCCGCGCC
GTCCGCCTCG ACATGCTGGA ACGTGTTGCC GACATCATTC GCCCCGTCAT AGCCGCTCGC
AGCTTCAATG GCGGCTTTGT CGTGACGCCC GACATGATGT CGCTCGTAGG CTGTTCCGGC
GAAGAATTCG CCGGTTTGCT GCGCGGGCTC GGCTATCGCT CGCAGCTTGA AAAGATAACG
CCCCCTGCCC CTCCGGCGCA TCCGTCACAG GAGCCGGAAG CGGTTCCCGG GGATCAGGCT
TCCGCAGGCA CTGTCTCCAC GGTTAATGAG ACGGCTGCCG CGGCTGAAAC GCCCGAACAA
GCGGCTGAGT CACAAGAACA GGAAACGGCT CCTTCCCCCG AAGCCGAAGA GATGAAACCG
TCCGAAGCCA GCCCCGCTGC CGCGGCGGCC GATAGCTCAG CGGAAGCCGC GCCCCTCGAA
GCGGAGGCTC CTGCCGAGCC CTCCGCCACT GCCGAACCGG TGGAAATGGA AATCTGGCGG
CCGGCGCGCC GGAAAAGTGG CGGCAGGCCA AAAGAGGATC AGAGGAAGCC GAGGCGCGAC
AAGCAGAAGC CGGAACATCG AAACGAGCAC CGAGGCAAGC CGTCCCGCCG TGAGGGCCGC
CAGGAACAGC GCCCGGAAGC GCCGCGCAAG CCGCGTGAGC GGGAACGCCA GCCAGACCCG
GATTCGCCCT TCGCAGCCCT TGCTGTTCTC AAAGAACGCG CCCGCGGCAA CTGA
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| Protein sequence | MSTASLQTVI GRARDGLAER RRVTAVLGPT NTGKTHLAIE RMMAHRTGMI GLPLRLLARE
VYDRVVKAKG AREVALITGE EKILPPTARY YVCTVEAMPL DLEVDFLAID EIQLAADRER
GHTFTDRLLR ARGHSETMML GSETVRGLIQ KLLPDTLFIS RPRFSELSWT GSKKITRLPR
RSAIVAFSAD QVYAIAELIR RQRGGAAVVM GALSPRTRNA QVALYQSGDV DFLVATDAIG
MGLNMDVDHV AFASTEKFDG RLHRPLHVAE LAQIAGRAGR HMNNGTFGVT GEAGPLSDEI
VSRIENHQFE PERVFQWRNP HLEFGSVAAL MRSLEMPPGR PGLARAPIAN DLEALTRMSR
DQDVQNLARS PAAIRRLWEV AQVPDFRKTL ASEHATLLTR LYLFLMEPGG GTEARIPDDW
LDRQMKTLER TDGDIDMLSA RLAHIRTWTY VANRADWLHN PVHWQERTRT IEDRLSDALH
ERLTQRFIDR RTSVLMKRLR QNEDLMAAVN GDGEVLVEGE YVGRLQGFVF VPDPRAEGEQ
GRVLRAAANQ ALTGEIADRA QRLTVAPDAE ITLSEHGRIL WAGHPVAELK SGDAPLAPRV
ELVAGEELNG PARESVQTRL EAWLKMHITN VLAPLVSLRD ATDVEGLARG IAFRLVENLG
SVKRDQVAED VRLLDQAARG QLRKHGVRFG AYSVFMPALL KPAPARLLLT LWSLTRKDLD
DPFSGLPPSP APGLTSVPAD TAAPQGFYEA LGFRVCGTRA VRLDMLERVA DIIRPVIAAR
SFNGGFVVTP DMMSLVGCSG EEFAGLLRGL GYRSQLEKIT PPAPPAHPSQ EPEAVPGDQA
SAGTVSTVNE TAAAAETPEQ AAESQEQETA PSPEAEEMKP SEASPAAAAA DSSAEAAPLE
AEAPAEPSAT AEPVEMEIWR PARRKSGGRP KEDQRKPRRD KQKPEHRNEH RGKPSRREGR
QEQRPEAPRK PRERERQPDP DSPFAALAVL KERARGN
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