Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1692 |
Symbol | |
ID | 5453432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1827524 |
End bp | 1829038 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877267 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001412968 |
Protein GI | 154252144 |
COG category | [R] General function prediction only |
COG ID | [COG4784] Putative Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.147911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC GCATTTCCAT GAGGCGGCAA GAGGCATCAC AAGAACGGCA GAGCCTTGCG GGCGGAACGA AAGGCCTGAC TGCGATTCTC GTCGCGGCCG GCATGCTGGC CGTTGGCGCC TGCAGCACCA ATCCGGCGAC AGGCAAAAGC CAGATCACGC CGCTGATGTC CACCGAGCAG GAGGCGCGGG CGGGAGCCGA AGCGCATCCG AAGATTCTGG CGGCCTATGG CGGCGCCTAT GAGAACGAGA AAATCGGCGG CTATGTTGCC GGTGTGACAG CGCGCATTGC GCGCGCAACC AATCAACCGG ATGGCCCATA CAGGGTCACG GTGCTCGATA GCCCGGTGGT CAACGCCTTT GCCTTGCCTG GTGGTTATGT CTATGTCACG CGCGGCTTGA TGGCGCTTGT CAATGATGAA GCCGAACTCG CAGGCGTGAT CGGCCACGAG ATCGGGCATG TTGCGGCGCG CCATTCCGCG CAGCGACAGA CCGCGGCGAT GGGCACATCG CTACTTGGCG CCGTCCTCGG CGCGGTCGTC GGAAGCAACG TGGTCAATCA GGCTTTCGGT CTGGGCGGGC AGGGCTTTCT TGCCAGCTAT TCACGTGACC AGGAATATGA GGCCGACATG CTCGGCGTCC GGTATCTGGC CGCCGCGGGT TACGATCCCT ATGCGGCGGC CGGCTTTCTC AATTCGATGG GCGCGCAAGA AGCGCTCAAC GCAAAAATGA GGAACGCGCA ACACGATGCC TCCCGGAATG ACTGGCTGGC AAGCCATCCG GCGACGCCTG CGCGGGTTGC CGCCGCGAAC ACGCATGCCG GGCAAACACA AATTCCGGCG GGGCAGCGCG AGCGTGGGCG GGATGCCTAT CTGAAGGCCA TCGACGGCAT GCTCTATGGC GACGATCCGA AAGAAGGCAT CGTGCGAGAC CGGGAGTTTG TGCATCCGGA GCTGGGCTTT TCCTTCAAGG CGCCGCCCGG CTTCACGCTC ACCAATACTT CGTCGGCTGT TATCGTTCAG GGGCCCGACC GAACGATCGC TCAATTCGAC ATGGGCCGGA AAGCGGCGGG CACAGAGATC GGACAATATC TTGCAGGCGA ATGGGGCAAG GGGGTCAGTC TCTCCGCGCT CGAACGCTTT ACCGTGAATG GAATGAAGGC CGCTACGGCC ACCGCCAAGG TCGGCGAATA TAATGGACGG CTGGTTGCAA TCGAGTTCGC GCCGGACCGC GTTTACCGGT TTCTAACGGG AACGCTGCCG CAAGCCGGGA CACGTTATGA CGCGGCACTG CGTGAACTTG TCATGAGCTT CCGCAAGATA TCGGCGGCGG AAGCGCGCGC CGTCAAACCG CTGCGCATAA GGATTGTAAC CGTAAAGCCC GGAGATACTG CGGCAAGCCT TGGCCGCCGC ATGGTCTATT CCGATTTTCA GGCGGAACGC TTTCGTGTGC TGAACGGGCT CGAGCCCAAT GAGGAGCCGA GGCCCGGCGC GCAGGTCAAA CTGGTCACCG AATAG
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Protein sequence | MAERISMRRQ EASQERQSLA GGTKGLTAIL VAAGMLAVGA CSTNPATGKS QITPLMSTEQ EARAGAEAHP KILAAYGGAY ENEKIGGYVA GVTARIARAT NQPDGPYRVT VLDSPVVNAF ALPGGYVYVT RGLMALVNDE AELAGVIGHE IGHVAARHSA QRQTAAMGTS LLGAVLGAVV GSNVVNQAFG LGGQGFLASY SRDQEYEADM LGVRYLAAAG YDPYAAAGFL NSMGAQEALN AKMRNAQHDA SRNDWLASHP ATPARVAAAN THAGQTQIPA GQRERGRDAY LKAIDGMLYG DDPKEGIVRD REFVHPELGF SFKAPPGFTL TNTSSAVIVQ GPDRTIAQFD MGRKAAGTEI GQYLAGEWGK GVSLSALERF TVNGMKAATA TAKVGEYNGR LVAIEFAPDR VYRFLTGTLP QAGTRYDAAL RELVMSFRKI SAAEARAVKP LRIRIVTVKP GDTAASLGRR MVYSDFQAER FRVLNGLEPN EEPRPGAQVK LVTE
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