Gene Plav_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1692 
Symbol 
ID5453432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1827524 
End bp1829038 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content62% 
IMG OID640877267 
Productpeptidase M48 Ste24p 
Protein accessionYP_001412968 
Protein GI154252144 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.147911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC GCATTTCCAT GAGGCGGCAA GAGGCATCAC AAGAACGGCA GAGCCTTGCG 
GGCGGAACGA AAGGCCTGAC TGCGATTCTC GTCGCGGCCG GCATGCTGGC CGTTGGCGCC
TGCAGCACCA ATCCGGCGAC AGGCAAAAGC CAGATCACGC CGCTGATGTC CACCGAGCAG
GAGGCGCGGG CGGGAGCCGA AGCGCATCCG AAGATTCTGG CGGCCTATGG CGGCGCCTAT
GAGAACGAGA AAATCGGCGG CTATGTTGCC GGTGTGACAG CGCGCATTGC GCGCGCAACC
AATCAACCGG ATGGCCCATA CAGGGTCACG GTGCTCGATA GCCCGGTGGT CAACGCCTTT
GCCTTGCCTG GTGGTTATGT CTATGTCACG CGCGGCTTGA TGGCGCTTGT CAATGATGAA
GCCGAACTCG CAGGCGTGAT CGGCCACGAG ATCGGGCATG TTGCGGCGCG CCATTCCGCG
CAGCGACAGA CCGCGGCGAT GGGCACATCG CTACTTGGCG CCGTCCTCGG CGCGGTCGTC
GGAAGCAACG TGGTCAATCA GGCTTTCGGT CTGGGCGGGC AGGGCTTTCT TGCCAGCTAT
TCACGTGACC AGGAATATGA GGCCGACATG CTCGGCGTCC GGTATCTGGC CGCCGCGGGT
TACGATCCCT ATGCGGCGGC CGGCTTTCTC AATTCGATGG GCGCGCAAGA AGCGCTCAAC
GCAAAAATGA GGAACGCGCA ACACGATGCC TCCCGGAATG ACTGGCTGGC AAGCCATCCG
GCGACGCCTG CGCGGGTTGC CGCCGCGAAC ACGCATGCCG GGCAAACACA AATTCCGGCG
GGGCAGCGCG AGCGTGGGCG GGATGCCTAT CTGAAGGCCA TCGACGGCAT GCTCTATGGC
GACGATCCGA AAGAAGGCAT CGTGCGAGAC CGGGAGTTTG TGCATCCGGA GCTGGGCTTT
TCCTTCAAGG CGCCGCCCGG CTTCACGCTC ACCAATACTT CGTCGGCTGT TATCGTTCAG
GGGCCCGACC GAACGATCGC TCAATTCGAC ATGGGCCGGA AAGCGGCGGG CACAGAGATC
GGACAATATC TTGCAGGCGA ATGGGGCAAG GGGGTCAGTC TCTCCGCGCT CGAACGCTTT
ACCGTGAATG GAATGAAGGC CGCTACGGCC ACCGCCAAGG TCGGCGAATA TAATGGACGG
CTGGTTGCAA TCGAGTTCGC GCCGGACCGC GTTTACCGGT TTCTAACGGG AACGCTGCCG
CAAGCCGGGA CACGTTATGA CGCGGCACTG CGTGAACTTG TCATGAGCTT CCGCAAGATA
TCGGCGGCGG AAGCGCGCGC CGTCAAACCG CTGCGCATAA GGATTGTAAC CGTAAAGCCC
GGAGATACTG CGGCAAGCCT TGGCCGCCGC ATGGTCTATT CCGATTTTCA GGCGGAACGC
TTTCGTGTGC TGAACGGGCT CGAGCCCAAT GAGGAGCCGA GGCCCGGCGC GCAGGTCAAA
CTGGTCACCG AATAG
 
Protein sequence
MAERISMRRQ EASQERQSLA GGTKGLTAIL VAAGMLAVGA CSTNPATGKS QITPLMSTEQ 
EARAGAEAHP KILAAYGGAY ENEKIGGYVA GVTARIARAT NQPDGPYRVT VLDSPVVNAF
ALPGGYVYVT RGLMALVNDE AELAGVIGHE IGHVAARHSA QRQTAAMGTS LLGAVLGAVV
GSNVVNQAFG LGGQGFLASY SRDQEYEADM LGVRYLAAAG YDPYAAAGFL NSMGAQEALN
AKMRNAQHDA SRNDWLASHP ATPARVAAAN THAGQTQIPA GQRERGRDAY LKAIDGMLYG
DDPKEGIVRD REFVHPELGF SFKAPPGFTL TNTSSAVIVQ GPDRTIAQFD MGRKAAGTEI
GQYLAGEWGK GVSLSALERF TVNGMKAATA TAKVGEYNGR LVAIEFAPDR VYRFLTGTLP
QAGTRYDAAL RELVMSFRKI SAAEARAVKP LRIRIVTVKP GDTAASLGRR MVYSDFQAER
FRVLNGLEPN EEPRPGAQVK LVTE