| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1667 |
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| Symbol | |
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| ID | 5456291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1799601 |
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| End bp | 1801187 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877241 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412943 |
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| Protein GI | 154252119 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.295548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGC TCCGCTCGCC GCTCGTTCAT CCATTCTCGA ATTTCGATGT GCCGCATTTG
CTGGCCGTCC ATGTCGCGGC GCGGCCAGAG CATCCGTTCC TGATCTGGGA GCCGTTCGAG
GGTGCCGCGA AGACGTGGAG CTACCGTGCC TTCGCGCATG AGGTGGCCCA AGTTGCGGCG
GGGCTGAAGA AGCGCGGCGT GAAGACGGGC GAGCGTGTTC TCATCCATCT CGACAATTGC
CCCGAAAGCC TCATCGCCTG GTATGCCTGC GCCCATCTCG GTGCCGTCGC CGTCACCACC
AATGCACGCT CCGTCGAGGA TGACCTGATC TACTTCAGCG ACCATGCCGA AGTCGTGGGC
GCGATCACGC AGCCGGCTTT CGCCTCGCTC GTCGCCGCCT CCTGCAGGAA GATCAAATGG
CTCGCCGTCA CCGAGACGGA TAATGGCGCC GCGCCGAAAG AGACGAACCG CCCGGCGAAG
TCCGAAAGCT TCTCCGCGCT TTACGGCGAC GCGGCGGATG TGCCGCTCCG CGCGCCCGAT
CCCATGCTCG CCGTCGGTGT GCAATACACC TCCGGCACCA CCTCGCGGCC CAAGGGTGTC
GTCTGGACGC ATGCGAACGC GCTCTGGGGT GCGAAGCTCT GCGCCATGCA TGAAGACCTT
CGCGCCTCCG ACGTGCATCT CACCTATCTG CCGCTCTTCC ACACCAACGC GCAGTCCTAT
TCGGTGCTGG CCGCGCTCTG GGTGGGCGCC ACCGTGGTGC TGCAGCCGCG TTTCTCCGCT
TCGCGCTTCT GGAATATCTC GGCGAAGCAT GGCTGCACCT GGACCTCCAT GGTGCCCTTC
TGCGTCCGCG CGCTGATGAG CCAGGAAAAG CCGAAGTCGC ACAGCTACCG CTATTGGGGC
AACGGCATTT CCGCGCCGCC GACGGACGCA CATTTCGGCG TCAAGACCAT CGGCTGGTGG
GGCATGACGG AAACGATCAC GCATGGCATC GTCGGCGACA TTCACCTGCC GAACCGGCCC
ATGTCGATCG GCAAGCCCTC TCCGGCTTAT GAAATTGCGA TCCTCGACGA CAATGGCGCT
TCTGTTGCGC CGGGCGAGAC GGGCAATCTT CTCGTGCGCG GATATCCGGG CCTCTCGCTC
TTCCTTGAAT ATCTGAACAA TCCCGAAGCG ACCTCGAAGA GCTTCGATGA GCAAGGCTAT
TTCATCACCG GCGACCGCGT GACGCTCGGC GAAGACGGCT TCATCTCCTT TGCCGACCGC
GACAAGGACA TGCTGAAGGT CGGCGGCGAA AATGTCGCGG CCTCCGAAAT AGAGCGCGTC
GTGATGACCG TGCCGGGCAT CCAGGAATGC GCGGTGGTGG CGAAAAGCGA CCCGATGCTG
GACGAAGTGC CGGTTCTCTT CGTTCTGGTG CCGGGCGGCG AGGCGTCGGC GCCGAAAGAC
CTTGCTGCGC AGATCGACGC AGCCTGCGCC AAGGGCCTTG CGGATTTCAA GCGTCCGCGC
GAGATTCGGA TTGTCGATGC GCTGCCGCGC TCGACGCTCG AAAAGATCGC CAAGGCTGAA
CTCAGGCGTA TCGTCGAGAA CGGCTGA
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| Protein sequence | MPALRSPLVH PFSNFDVPHL LAVHVAARPE HPFLIWEPFE GAAKTWSYRA FAHEVAQVAA
GLKKRGVKTG ERVLIHLDNC PESLIAWYAC AHLGAVAVTT NARSVEDDLI YFSDHAEVVG
AITQPAFASL VAASCRKIKW LAVTETDNGA APKETNRPAK SESFSALYGD AADVPLRAPD
PMLAVGVQYT SGTTSRPKGV VWTHANALWG AKLCAMHEDL RASDVHLTYL PLFHTNAQSY
SVLAALWVGA TVVLQPRFSA SRFWNISAKH GCTWTSMVPF CVRALMSQEK PKSHSYRYWG
NGISAPPTDA HFGVKTIGWW GMTETITHGI VGDIHLPNRP MSIGKPSPAY EIAILDDNGA
SVAPGETGNL LVRGYPGLSL FLEYLNNPEA TSKSFDEQGY FITGDRVTLG EDGFISFADR
DKDMLKVGGE NVAASEIERV VMTVPGIQEC AVVAKSDPML DEVPVLFVLV PGGEASAPKD
LAAQIDAACA KGLADFKRPR EIRIVDALPR STLEKIAKAE LRRIVENG
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