| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1660 |
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| Symbol | |
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| ID | 5456527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1792416 |
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| End bp | 1793987 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877234 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412936 |
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| Protein GI | 154252112 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.104845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.559317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATA TCGCACAGGT TCGCTCGGTA GCCGACATCA CGCGGGTATG GGGCTCGGGC
GCGCCGGATG CCATCGCGCA GGTCTTCGAG GGGCGGGAAA CGAGCTATGG CGAGCTGGAC
CGCCGCGCCA GCCAGGTCGC GCAGGCGCTG ATCGCGGATG GCTGCAAGCC CGATGCCCGC
ATCGGTTTCA TGGGCAAGGG GTCCGACCGC TATTTCGAAA TGCTCTATGG CGCCTTCAAG
GCGAAGGCCG TCGTCGTGGG CGTCAACTGG CGTCTCGCGC CGCCGGAGGT TGCCTATGTG
CTGAATGACA GCCGTACCGA AATCCTGTTC GTCGGCGCTG AATTCTACGA CATCGTGGAA
AAGGTGCTGC CGGAGTGTCC GACGGTGCGC AAGGTGATCG CGCTTGATGG CGGCCGCAAC
GACTGGACCT CCTTCGACGA TTGGCGCGAT GCCGCGAAAT CCGAAGATCC GATGCTGCCC
GCCGATCCCG ACGATGACGT GATCCAGCTC TATACGAGCG GTACCACCGG CCATCCGAAA
GGCGTGCAGC TTACAAATGC CAATTACATG TCGATCTTCG CCCAGGGCGG CGAGGCCGGC
TGGGCAAATT GGGGCGAGGG CGAAGTTGCG CTGGTCTGCA TGCCGCTGTT CCATGTCGCG
GGCGTCAATA TCGGCCTCAT CGGCAATATC CACGGCTGCA AGAACATCAT TTTGAAGGAT
GTCGATCCGC AGGCGATCCT GAAGCTCATC GAGAGCGAGA AGATCAACAT CGCCTTCATG
GTGCCTGCCG TCATTCTCTT CCTCCTGCAG CAGCCCAACA TGGCGACGAC GGACGTTTCG
TCGATCCGCC AGATCCTCTA CGGCGCTTCG CCGATTGCCG AAGACGTGCT GCGCCGGGCG
CAGGATACGT TCAAGGGCGC CGACTTCGTG CAAGTCTACG GCCTCACCGA AACGGCGGGC
GGCGCGACCA ACCTGCCGCC GGAGGCGCAT GATCCCGCCA AGGGCAAGCT CCGCTCCTGC
GGCATCCCCA ATCCCGGCAT GGAAGTGCGC GTGGTGGACG ACAAGGGCGC CGATGTGCCG
ACCGGCGAGG TCGGCGAAAT CGTCATTCGC GGTGCTTCGA TCATGAAGGG CTACTGGAAC
CGCGCCGACG CAACGAAGGA TGCGATCCGC GACGGCTGGT TCTATACGGG CGACGCCGGC
TTCTTCGACA ATGACGGCTA TCTCTTCATC CATGACCGGG TGAAGGACAT GATCGTGTCG
GGCGGTGAAA ACATCTATCC CGCCGAAGTC GAGAATGCGC TTTTCGGCCA TGCCGCCATT
GCCGATGCCG CCGTCATCGG CGTGCCGGAC GAGAAGTGGG GCGAAGCGGT AAAGGCCATC
GTCGTTCTGA AGCCTGGCGA GCAAGCCACA CCGGAAGAGA TCATCGCCTT CGCGAAGACG
CGTATCGCCA GCTACAAGGT GCCGAAATCG GTCGATTTCA TCCAGGCGCT GCCGCGCAAT
CCGTCGGGAA AGATTCTCCG GCGCGAGCTG CGCGCACCGT TCTGGGAAGG CCGCGCGCGC
ATGGTCAACT GA
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| Protein sequence | MVDIAQVRSV ADITRVWGSG APDAIAQVFE GRETSYGELD RRASQVAQAL IADGCKPDAR
IGFMGKGSDR YFEMLYGAFK AKAVVVGVNW RLAPPEVAYV LNDSRTEILF VGAEFYDIVE
KVLPECPTVR KVIALDGGRN DWTSFDDWRD AAKSEDPMLP ADPDDDVIQL YTSGTTGHPK
GVQLTNANYM SIFAQGGEAG WANWGEGEVA LVCMPLFHVA GVNIGLIGNI HGCKNIILKD
VDPQAILKLI ESEKINIAFM VPAVILFLLQ QPNMATTDVS SIRQILYGAS PIAEDVLRRA
QDTFKGADFV QVYGLTETAG GATNLPPEAH DPAKGKLRSC GIPNPGMEVR VVDDKGADVP
TGEVGEIVIR GASIMKGYWN RADATKDAIR DGWFYTGDAG FFDNDGYLFI HDRVKDMIVS
GGENIYPAEV ENALFGHAAI ADAAVIGVPD EKWGEAVKAI VVLKPGEQAT PEEIIAFAKT
RIASYKVPKS VDFIQALPRN PSGKILRREL RAPFWEGRAR MVN
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