| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1658 |
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| Symbol | |
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| ID | 5453902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1791076 |
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| End bp | 1791639 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877232 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001412934 |
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| Protein GI | 154252110 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.565944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.978426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGGA TTCCCTATCC CGATCCGGCC GGCCTGCCGC CGGAGAACCG GGCGCTGCGC
GAAACGCTGC CGCCGCTGAA TATCTTCAGG ATGCTCTCCG GCGCGGGCAC ATCCTTTCCG
GCCTTCATGC GGCTCATCAA CGCTTATCTG AACGATGGCG TACTCGATCC GGAATTGCGC
GAGCTGGTGA TCCTGCGCGT CGGCCACCTC TGCGGCTCTC GCTACGAGGT GCACCAGCAC
AAGCGTGTGT CGCGCATGCT GGGTATGAGC GCAGAGCGGA TCGAGGCGGC GGCAGGCAGC
CTGCCCTCGC CTTACCTGAG CGGCAGCGAA AACGCCGTTC TTGCCTTCAC CGATAACCAG
GTGGCGCAGG TAAAGGCCGA TGACGCTCTT TTTGTCACCG CGCATGAACA TCTCGGCGAT
GCCGGCATGC AGGAACTCGT TATCGTGATC GGCATCTATC TTCTCGTCTG CCGCTACCTC
GAAACTTTCG AGATCGAAAT CGAGGACGAG GACATTCCGA CCAGCGGGCT CGATGAAATA
AGAAGGAGCA TGGAAAAGCC ATGA
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| Protein sequence | MARIPYPDPA GLPPENRALR ETLPPLNIFR MLSGAGTSFP AFMRLINAYL NDGVLDPELR
ELVILRVGHL CGSRYEVHQH KRVSRMLGMS AERIEAAAGS LPSPYLSGSE NAVLAFTDNQ
VAQVKADDAL FVTAHEHLGD AGMQELVIVI GIYLLVCRYL ETFEIEIEDE DIPTSGLDEI
RRSMEKP
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