Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1652 |
Symbol | |
ID | 5454214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1785527 |
End bp | 1786507 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640877226 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001412928 |
Protein GI | 154252104 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.685243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTGG GTCTCAGCCG GTTTCAATAT ACGAAGGGCC TGCACGATCT CGGCAATGGC GGCTATGCCT GGCTGCAGCC GGACGGCGGA TGGGGCTGGT CGAATGCCGG CCTCATCGTC GATGGGGGTG AATCGTTTCT CATCGATACA TTGTTCGACG TACCGCTCAC CCGCGACATG CTCGATGCCA TGCGGAAGGC GGAACCGAAG GCCGCCGCAA AGATAAACAC ACTCGTCAAC ACGCATCACA ATGGCGACCA CTGCAACGGT AACGAATGCT GCCAGGGTGC TGAAATTATT GCACACAAGC TCGCGGTTGA AGGCATGCGG CACGAACCGC CCGCCCTGCT CGCGGGCTTT CTGGACATGG CACCAGGTCT CGGCGACCTC GGCAAATATG TGAAGCAGTG CTTCGGTCCC TTCGATTTCA AGGGCGTTAC GCAAACCCTG CCGGAAGTGA CTTTCGAGAC GGAACTCACG CGCCATGTCG GATCGAAGGA AATTCGCATC ATGCATGTAG GCCCTGCTCA CACGCCGGGC GATGCGCTTG TTTACGTTCC GGCCGACAAG ACGGTTTTCA CGGGCGACAT TCTGTTCATC GAGGGGCATC CGATCATGTG GGAAGGACCC GTCTCGAACT GGATCGACGC CTGCGACAGG ATCATGGCGA TGGACGTTGA AACCGTCGTG CCGGGCCATG GACCCATCAC TGGCAAGAAC GGTGTGAAGG CGGTACGGGA TTATCTGGTC TATGTCCGCG ACGAAGCGCG TAAACGCTAC GACGCCGGCC TGTCTGCGTT TGACGCCGCG CTCGATATCG ACATGACGGA CTACGATAGC TGGGGCGACG GAGAACGGAT CGTCGTCAAC GTCACGACGC TCTACAAGGA ATTTTCCGGC GACGACACAC CAAACGACGT GCCAACGATC TTTGGCCAGA TGGCGGAAAT TACAAAAAGA CAAGGCCGTC TGAAAGGCTG A
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Protein sequence | MGLGLSRFQY TKGLHDLGNG GYAWLQPDGG WGWSNAGLIV DGGESFLIDT LFDVPLTRDM LDAMRKAEPK AAAKINTLVN THHNGDHCNG NECCQGAEII AHKLAVEGMR HEPPALLAGF LDMAPGLGDL GKYVKQCFGP FDFKGVTQTL PEVTFETELT RHVGSKEIRI MHVGPAHTPG DALVYVPADK TVFTGDILFI EGHPIMWEGP VSNWIDACDR IMAMDVETVV PGHGPITGKN GVKAVRDYLV YVRDEARKRY DAGLSAFDAA LDIDMTDYDS WGDGERIVVN VTTLYKEFSG DDTPNDVPTI FGQMAEITKR QGRLKG
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