| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1643 |
|---|
| Symbol | |
|---|
| ID | 5456572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1776752 |
|---|
| End bp | 1777348 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640877217 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001412919 |
|---|
| Protein GI | 154252095 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGC GGCGGCGGCT GTCGGCCGAC CCCTCTCTTG CACTGCCGAT AGAGACATCG
CGGCTGCTGC TGAGGGACTT TGTTTCGCGC GACCTTGAAG CGGTCCACGC CTATTCCTCC
GCAAAGGAGG TAACGCGCTA CCTGATCTGG GGACCGAATA CGCTTCTCCA AAGCAAGCAG
ACAATCCGCG CCTTTCTGGA CGATCAGAAG GAACGGCCTC GGATCAACTT CGATCTGGCG
ATTGTCCGGA AGGGCACCAC GCGGCGGGGC GATGAACCGA AGCTCATCGG TGGCGTCGGC
CTGAAGCTTG TCGACTGGGA TAATCGTACG GCCGATATCG GCTATGTTCT TCATCCGGAT
TACTGGGGGC AGGGCTATGC GCTGGAGGCG GCACAGGGGT TGGCTGCGGC GGGCTTCAGG
GATCTTGGCC TGCAGCGGAT TGTCGCCACG TGCGATCAGC GCAACAAGGC ATCTGCTCGG
GTAATGGAAA GGCTCGGCAT GCGCCGTGAA GGGTCATTTC GCCGGAGCAA ATATATTCAA
GGCGGCTGGC GGGATGAATT TCTCTACGCC CTTCTTGCCG AGGAGTTTTA CGTCTGA
|
|---|
| Protein sequence | MRLRRRLSAD PSLALPIETS RLLLRDFVSR DLEAVHAYSS AKEVTRYLIW GPNTLLQSKQ
TIRAFLDDQK ERPRINFDLA IVRKGTTRRG DEPKLIGGVG LKLVDWDNRT ADIGYVLHPD
YWGQGYALEA AQGLAAAGFR DLGLQRIVAT CDQRNKASAR VMERLGMRRE GSFRRSKYIQ
GGWRDEFLYA LLAEEFYV
|
|---|
| |