| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1631 |
|---|
| Symbol | |
|---|
| ID | 5454166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1767181 |
|---|
| End bp | 1768083 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640877204 |
|---|
| Product | glutamyl-tRNA synthetase class Ic |
|---|
| Protein accession | YP_001412907 |
|---|
| Protein GI | 154252083 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGA AGACAAGCGG GCAGGAGACA TTGCGGTTCG CCCCGAGCCC CAATGGCTGG
CTGCATCTCG GCCATGCCTA TTCCGCACTG TTTGCGTGGG AGATGGCGGC GGCATTGCAC
GGCCGCTTCC TGCTCCGTAT CGAGGATATC GATACCGGCC GCTGCCGGCC GGAATTCGAA
GCCGCTATCT ATGAAGACCT CGCATGGCTG GGCATCGATT GGGAACAGCC GGTCCGCCGC
CAATCCGAGC ATTTTGCCGA TTATGAGCAG GCGCTGAAAA ACCTCCGCGA TATGGAAGTC
GTCTATCCCT GCTTTGCGAC ACGCAAGGAA ATCCAGGACG CCATCATTGC CTCCGGCGTT
CCCCTTCAGA ACTGGCCGCG AGACCCCGAC GGCGCGCTCC TCTATCCCGG TATCTACAAG
GACATACCGC GCGCGAAGCT CAACAAGCTG ATGTGGGAAG GCCGCACCTA TGCCTGGCGG
CTCGACATCG CGAAGGCATT GCAGCTTGCC GAGGCGCGGA CGGGAGCACT CATAACCTTT
CGTGAAGAAG GAGAAAGTGC CGGGGGTGAA CCGAAGAGAC TGCCGGTGAA GCCGGAACTC
TTCGGCGATG TGGTCATCGC CCGAAAGGAC GTACCCACCA GCTATCATCT GGCGGTGACG
GTGGACGACG CGCTGCAGGG CGTCACGCTG GTCACGCGCG GGCAGGACCT TTTTCCGGCG
ACCTATATCC ACCGCATCCT GCAGGTGCTG CTGGACCTGC CTGAACCGCG CTATCACCAT
CACGGTCTCA TCCGCGACGA GGAAGGCCGG CGTCTTTCAA AAAGCGCCAA AGATATGGGC
TTGCGGGAAC TGCGCGCCGC CGGCCACAGC CCCGCCGACA TAAGACGCAT GGTCGGGCTT
TAA
|
|---|
| Protein sequence | MQEKTSGQET LRFAPSPNGW LHLGHAYSAL FAWEMAAALH GRFLLRIEDI DTGRCRPEFE
AAIYEDLAWL GIDWEQPVRR QSEHFADYEQ ALKNLRDMEV VYPCFATRKE IQDAIIASGV
PLQNWPRDPD GALLYPGIYK DIPRAKLNKL MWEGRTYAWR LDIAKALQLA EARTGALITF
REEGESAGGE PKRLPVKPEL FGDVVIARKD VPTSYHLAVT VDDALQGVTL VTRGQDLFPA
TYIHRILQVL LDLPEPRYHH HGLIRDEEGR RLSKSAKDMG LRELRAAGHS PADIRRMVGL
|
|---|
| |