Gene Plav_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1620 
Symbol 
ID5456629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1754092 
End bp1754613 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID640877193 
Productrhodanese domain-containing protein 
Protein accessionYP_001412896 
Protein GI154252072 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000202366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA GGACCCTCAC CCCCGAAGAA GCGAAGGCGA TGGCCGCGCG CGGCGCCGTC 
ATCGTCGACA TACGCGAGCC GGACGAGTTC GCCCGCGAGC ATATTCCGGG CGCAGTCAAT
GAGCCGCTCT CGAAGCTTGG CGGCCATCCG GCCGCCGCGG GCGCGGGCAT CGTCGTCTAT
CACTGCAAAT CCGGCATGCG CACCAAAGCC AATGCCGCGA AGCTCGCCGC CCCGGAAAGC
TGCGAAGCCT ATATACTCGA AGGCGGGATC GATGCCTGGA AGGCGGCGAA GCTGCCCGTC
GCGGCCGATG CCGCGCAGCC CCTCGAGCTG ATGCGCCAGG TGCAGATCGC GGCGGGCTCG
CTCGTCTTGC TCGGTGTGGC GCTCGGCGCG GGCGTGCATC CGGGCTTCTA CGCGCTTTCG
GCTTTCGTCG GCGCGGGCCT CGTCTTTGCC GGCGTCTCCG GCTTTTGCGG CATGGCGCGC
TTCCTCACGG CTATGCCGTG GAACCGGGCG CTGCGCGCCT GA
 
Protein sequence
MSLRTLTPEE AKAMAARGAV IVDIREPDEF AREHIPGAVN EPLSKLGGHP AAAGAGIVVY 
HCKSGMRTKA NAAKLAAPES CEAYILEGGI DAWKAAKLPV AADAAQPLEL MRQVQIAAGS
LVLLGVALGA GVHPGFYALS AFVGAGLVFA GVSGFCGMAR FLTAMPWNRA LRA