Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1620 |
Symbol | |
ID | 5456629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1754092 |
End bp | 1754613 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640877193 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001412896 |
Protein GI | 154252072 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000202366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCA GGACCCTCAC CCCCGAAGAA GCGAAGGCGA TGGCCGCGCG CGGCGCCGTC ATCGTCGACA TACGCGAGCC GGACGAGTTC GCCCGCGAGC ATATTCCGGG CGCAGTCAAT GAGCCGCTCT CGAAGCTTGG CGGCCATCCG GCCGCCGCGG GCGCGGGCAT CGTCGTCTAT CACTGCAAAT CCGGCATGCG CACCAAAGCC AATGCCGCGA AGCTCGCCGC CCCGGAAAGC TGCGAAGCCT ATATACTCGA AGGCGGGATC GATGCCTGGA AGGCGGCGAA GCTGCCCGTC GCGGCCGATG CCGCGCAGCC CCTCGAGCTG ATGCGCCAGG TGCAGATCGC GGCGGGCTCG CTCGTCTTGC TCGGTGTGGC GCTCGGCGCG GGCGTGCATC CGGGCTTCTA CGCGCTTTCG GCTTTCGTCG GCGCGGGCCT CGTCTTTGCC GGCGTCTCCG GCTTTTGCGG CATGGCGCGC TTCCTCACGG CTATGCCGTG GAACCGGGCG CTGCGCGCCT GA
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Protein sequence | MSLRTLTPEE AKAMAARGAV IVDIREPDEF AREHIPGAVN EPLSKLGGHP AAAGAGIVVY HCKSGMRTKA NAAKLAAPES CEAYILEGGI DAWKAAKLPV AADAAQPLEL MRQVQIAAGS LVLLGVALGA GVHPGFYALS AFVGAGLVFA GVSGFCGMAR FLTAMPWNRA LRA
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