Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1614 |
Symbol | |
ID | 5455707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1750043 |
End bp | 1751515 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877187 |
Product | cation transporter |
Protein accession | YP_001412890 |
Protein GI | 154252066 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000455151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCG CCAGAGTCTC CTTCGCCGAC AGCACCAAGG TCGTCGGCCT CGTGATCGGC GCGCTCCTCA TCGCGCTCTC CGTCGTGATG CTGGTCCCGG TTCTGGCTGA GATTGTCGCC GAGAGCGGCG ACTGGGAAGC CTTCCTGTCG AGCGCCGTCG TCACCGGCTT TGTCGGCGGC GCGCTGATGC TTTCCAACCA GACGGAGGAC CGCGATCTCG GCCACCGTGC CACTTTCCTC GTCACCACGC TTGGCTGGCT GTCGCTCAGC GCCTTCTCGG CGCTGCCCTT TGCCTTCTCC AAGGTCGATA TGAGCTATAC GGACGCCTTC TTCGAGGCCA TGTCCGGTTT CACCACCACG GGCTCCACGG TGATGGTCGG CCTCGATGCA ACGCCGCCCG GCCTTCTTCT CTGGCGCTCG CTCCTGCAAT GGATGGGCGG CATCGGCATC ATCGTCACGG CGGTCGCCAT TCTGCCGTTC CTGCGTGTCG GCGGAATGCA GCTCTTTCGT ACCGAAAGTT CCGACCGCAC GGAAAAAGTG TTGCCGCGCC CGGGTCAGAT CGCGGTCGCC ATCGGCGAGG TCTATCTGCT GCTCACCCTG CTTTGCGCGC TGGCCTATAT CATCGGCGGC ATGAGCGCGT TCGATGCGCT CAACCATGCG ATGACGACCA TCTCGACCGG CGGTTATTCG ACCCATGATG CGTCGTTCGG CTATTTCGAC AGCAGCTTCA TTCACTGGGC CGCCATCATA TTCATGGTCT CGGGTGCCTT GCCGCTCATC CTTTATGTGC AGACGCTGCG CGGCACCGGC GAAACATTGT GGGGCGATCC GCAGGTGCGC GCCTTCATCA CCATGCTCGC CGTCACCTCC GTCCTCATGG CACTCTGGCT CGCCGCCCGG GGCGACTATC ATTTTTTTGA GGCGTTGCAG CTCACCGCCT TCAACGTGGT TTCCGTCGTC ACCACAACGG GTTTCGCCAG CACCGACTAC ACGCTTTGGG GGCCGTTCGC GATCATGGCC TTTTTCATCC TGATGTTCAT CGGCGGCTGC ACGGGATCGA CGTCCGGTGG CCTCAAGATG TTCCGTCTGC AGATTCTCGC GCTCCTTTTC AAGAGCCAGG TCCGCCAGAC GCTCTATCCC CATGTCGCGC AGACATTGCG CTATGCCGAC CGCACGGTGA GCCGGGAGAT CGTTTTCTCC GTCGCGCTCT TCGTCTTCGT CTATATGGGG TCGATCCTTG CCGTCTCGCT GGCGCTCGCC GCTTTCGGCC TCGACCTCGT GACGGCGCTT TCCTCCGCCG TCACCGCCAT CGCCAATGTC GGCCCCGGCC TCGGCCCCGT CGTCGGCCCC GCCGGTAATT TCTCCTCCCT GCCGGACGGC CCCAAAATCA TCCTCGCCTT CGCCATGCTC CTCGGCCGCC TCGAACTGCT GACGGTGCTA GTGATGTTCT CGAAGGATTA CTGGGAGCGG TAA
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Protein sequence | MDGARVSFAD STKVVGLVIG ALLIALSVVM LVPVLAEIVA ESGDWEAFLS SAVVTGFVGG ALMLSNQTED RDLGHRATFL VTTLGWLSLS AFSALPFAFS KVDMSYTDAF FEAMSGFTTT GSTVMVGLDA TPPGLLLWRS LLQWMGGIGI IVTAVAILPF LRVGGMQLFR TESSDRTEKV LPRPGQIAVA IGEVYLLLTL LCALAYIIGG MSAFDALNHA MTTISTGGYS THDASFGYFD SSFIHWAAII FMVSGALPLI LYVQTLRGTG ETLWGDPQVR AFITMLAVTS VLMALWLAAR GDYHFFEALQ LTAFNVVSVV TTTGFASTDY TLWGPFAIMA FFILMFIGGC TGSTSGGLKM FRLQILALLF KSQVRQTLYP HVAQTLRYAD RTVSREIVFS VALFVFVYMG SILAVSLALA AFGLDLVTAL SSAVTAIANV GPGLGPVVGP AGNFSSLPDG PKIILAFAML LGRLELLTVL VMFSKDYWER
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