| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1582 |
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| Symbol | |
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| ID | 5454790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1719659 |
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| End bp | 1720558 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877155 |
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| Product | chorismate mutase |
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| Protein accession | YP_001412858 |
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| Protein GI | 154252034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.373623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG AGACGACCAG CCCTGAAAAA GCGCTTGCCG AGGTCCGCAA GGAAATCGAC
GCGCTGGATG ATGCGCTTCA CGATTTGCTG ATGAAGCGGA CGGAACTCGT CGTCGAGGTC
GCGGAAGCGA AAGCGCGTGC GGCGAGCGCG GCGGGGGAGG GCAGCTTTGT CGCTTTCCGC
CCGGCCCGCG AGGCGCAGGT TCTCAGGCGC CTTGCCGAGC GGCATCGGGG AAGCCTCCCT
GTCCGCGTCA TTTTCCGGCT CTGGCGGGAA ATAATAGCGG CCATGACGCG CATTCAGGGC
CCCTTCCGCG TGGATGTTTT CGGAGGCCAG GATGGCAGCG CGCTCAGTTT CTGGGACCTC
GCGCGCAGCT ATTACGGTTC GTCGACACCG ATGGAGCTGC ATGACAATGC GCGCGACGTC
TTGCGCCGTG TTGTTCAGGA CAGGTCTGTG GTCGGTATCT TGCCGGAGCC TGGAACTCAT
GCCGCCGCCG ACTGGTGGGT GATGTTTGCT GCCGGTGGCC AGTCTGAGGC GCGCGTTGTC
GCCTGCCTGC CTTTCATCGA CGTGGCGGAA GGCGAAAATC ATGTACGGGC GCTTGTGGTG
GCGCAGACCG GTTTCGAGCC GACGGGCGAC GATACGAGCC TCGTTGCCAT TTCGTCGTCG
GAAAGCCTGA GCGACAGCCG CGTCACCTCT CTGGTCGCAG CGGCCGGATT TTCAGGCCAG
CGGATCGCTG ACGCTAAACT TGCGGATGGA CCTTCCAGTC ACATCTACCT GATTTCCATG
CCGTTCCATG TGGCGGAGGA TGACAAGCGT CTCGCGGCGC TGGAAGGCGG CCCGATTTTG
GAGGCACGGC TTCTGGGCGG CTACGCGAAT CCGATCGAGC GAGCGACCGA TGGCGAATGA
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| Protein sequence | MTIETTSPEK ALAEVRKEID ALDDALHDLL MKRTELVVEV AEAKARAASA AGEGSFVAFR
PAREAQVLRR LAERHRGSLP VRVIFRLWRE IIAAMTRIQG PFRVDVFGGQ DGSALSFWDL
ARSYYGSSTP MELHDNARDV LRRVVQDRSV VGILPEPGTH AAADWWVMFA AGGQSEARVV
ACLPFIDVAE GENHVRALVV AQTGFEPTGD DTSLVAISSS ESLSDSRVTS LVAAAGFSGQ
RIADAKLADG PSSHIYLISM PFHVAEDDKR LAALEGGPIL EARLLGGYAN PIERATDGE
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