| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1576 |
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| Symbol | |
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| ID | 5454686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1714493 |
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| End bp | 1715416 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877149 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001412852 |
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| Protein GI | 154252028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.503537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.197144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCGGACC GGCCGAGAAG ATGGGGGCGC CAGTTGAAAT TTCTTTTGAT GATCCTGACT
GCGACAGCCG CAGCACTTTG GACGGCGCCG CCGGCAGCAG CGGCCGCCGC ACACACATGT
CAGACGGAAA CGCCGGTCAT TGGCGTACCG ACAAAAGGCG GACCCGCCTA TGGCGGCATG
CAGTATCCGC GCATGGTCGG CCTCGGCCCC AAGGAGGTCG CGCTTACCTT CGACGATGGG
CCAGATCCCA AAACCACGCG GCGCATTCTC GATATTCTGG ACCGGCACTG CGTCAAGGCG
ACATTCTTCA TGGTCGGTAT CTATGCCGAA CGTCATCCTG AGATCGTGCG CGAGGTTGCG
GCGCGCGGTC ATACGATCGG CACCCATACA TGGTCCCACC CAAACAATTT GCGCCCCTTC
TCGGCCACGC AAGCGCAGCG GGAAATCAGA CGGGGGTTTG CCGCCGTCGA GGCCGCGCTT
TCGCGGGCAC CGGAAGAAGA CCGGAACAGG CTGGCCCCTT TTTTTCGCTT TCCTGGCCTC
AATGACAGTA AATCCCTGAT CGAATGGCTT GGGCAGCGCA ACGTGGCGAC CTTCTCCTGT
GAATTCGGCG CCGATGACTG GAAGTCCATC AGCTCGGCAC AGGTGCGCAT CCGCGCGATC
CGCAACATCG CTTCCGTCGG CAGGGGCATT CTGATCCTTC ACGACACCAA GCCCCGGACG
GCCGAAATGC TCTCCGATTT CATCATGGCG ATGCGGCAGC AGGGCTACAG CTTTGTGCAG
ATGGTGCCGG AACCGGGCGG GCGCGAAATG GCGGCAGGCG CTCAGGACCC TCTGATCGGG
CCCGTCCGGC GAGCGGATGC CGCCTCGGTC CTTCTCGGTA CCATCATCGA GCCGTCGCTT
GAACCCCCGG CGCCTCTCCG CTAG
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| Protein sequence | MADRPRRWGR QLKFLLMILT ATAAALWTAP PAAAAAAHTC QTETPVIGVP TKGGPAYGGM
QYPRMVGLGP KEVALTFDDG PDPKTTRRIL DILDRHCVKA TFFMVGIYAE RHPEIVREVA
ARGHTIGTHT WSHPNNLRPF SATQAQREIR RGFAAVEAAL SRAPEEDRNR LAPFFRFPGL
NDSKSLIEWL GQRNVATFSC EFGADDWKSI SSAQVRIRAI RNIASVGRGI LILHDTKPRT
AEMLSDFIMA MRQQGYSFVQ MVPEPGGREM AAGAQDPLIG PVRRADAASV LLGTIIEPSL
EPPAPLR
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