Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1574 |
Symbol | |
ID | 5453994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1713047 |
End bp | 1713772 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640877147 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001412850 |
Protein GI | 154252026 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.50991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.311491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG TAGCGCTTGT AACCGGCGGT ACGCGAGGCA TCGGTCATGC AATCTCGCTG GCGCTCCGCG ACGTAGGCTA CACCGTTGCC GCGAATTATG CGGGCAATGA AGAGGCGGCT GCTGCCTTCA CCAAGGAAAC CGGCATAAAA AGCTACAAGT GGAATGTTGG CGACTATGAT GCTTGCGTCC AAGGCATTGC CTCGGTCGAG GCCGAGCTGG GCCCGGTCGA TGTGCTTGTC AACAATGCGG GGATAACGCG CGACGGCATG CTGCACAAGA TGACGCTGGC GCAATGGCGC GAGGTTATGA GCGTCGATCT CGATTCCATG TTCAATATGT GCCAACCGCT GATCGCCGGC ATGCGTGACC GTGGTTTCGG GCGCATCATC AATATTTCGT CGATCAATGG CCAGAAAGGC CAGATGGGGC AGACGAATTA TTCGGCGGCC AAGGCCGGCG TCATCGGCTT CACCAAGGCG CTGGCGCAGG AAGTGGCGAA GAAAGGCGTG ACGGTGAACT GTATCGCGCC CGGTTATGTC GACACGGATA TGGTGTCCGC CGTGCCGGAA AAGGTGCTTG AGGGCATTAT CTCGACAATT CCAGTCGGGC GGCTCGGCAA GTGCAACGAG ATCGCGCATT GTGTGAAATT TCTTGCCGAC GAGAATGCCT GCTTCGTTAC CGGTGCAACC ATCACCGTCA ACGGCGCGCA ATATATCGCG GGCTGA
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Protein sequence | MSKVALVTGG TRGIGHAISL ALRDVGYTVA ANYAGNEEAA AAFTKETGIK SYKWNVGDYD ACVQGIASVE AELGPVDVLV NNAGITRDGM LHKMTLAQWR EVMSVDLDSM FNMCQPLIAG MRDRGFGRII NISSINGQKG QMGQTNYSAA KAGVIGFTKA LAQEVAKKGV TVNCIAPGYV DTDMVSAVPE KVLEGIISTI PVGRLGKCNE IAHCVKFLAD ENACFVTGAT ITVNGAQYIA G
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