Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1567 |
Symbol | |
ID | 5455298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1705715 |
End bp | 1706536 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877140 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001412843 |
Protein GI | 154252019 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.870859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAG CGGAAAGGAT ATCCCCGGCG GACTTCACCT GCGTTCTCTA TGAAGTGCGC AATCATGTCG CCATTATCAC CATCAATCGC CCGGAACGGC GCAATGCGCT CAATCGCCGT GCCTATGATG AAGTGGAGGC GGCGTTCCGC GCGGCTTCCG CCGATACGGA TGTCCGCTGC GTGGTTGTCA CCGGTTCCGA CCCTGCTTTC TGCTCTGGCG AAGACGTGAA GGAGATGATG ACGGGCGAGG AACACGGAAA AAGCGTTCAG CGCCTCACCG CTGTCCGGCC GGAGCCTACC CCTGCGGCCG TCGCCGCGCT TGAATGCGAC AGGCCAGTCA TTGCGGCCGT CAACGGCGCC GCTGTCGGGT GGGGCATGGA GCTCACGCTC TTCGCCGATA TTCGCATTGC CTCGGAACAG GCGAAGTTCG GTGAGATATT CATCAAGCGG GGGCTTATCA CGGATGTCGG CGGCCTCTGG CGGCTGCCGG CCATCGTAGG ACCGGCAAAA GCGGCGGAGC TACTCTTTAC AGGCGATGTC ATCGGCGCGA GAGAAGCCGA GCGTATCGGC CTCGTAACGG AGGTAACGCC GCATGACCAG CTCATGGAGC GGGCGCTTGC GATGGCCGAT CGCATTGCGG TCAATGCGCC GCTGGCACTC CGCTTCATGA AGGAAGGGCT CCGCCGCACC GCCTATGGCG ACCTCCGCGA AATCGGAAGC TGGGTCAGCG GCACGCTGGG CAAGCTTTTC GAAACAGAGG ATCATCGGGA AGGCGTAAAA AGCTTCCTGG AGAAACGTGC TCCGGTTTTC AAAGGACGAT GA
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Protein sequence | MAKAERISPA DFTCVLYEVR NHVAIITINR PERRNALNRR AYDEVEAAFR AASADTDVRC VVVTGSDPAF CSGEDVKEMM TGEEHGKSVQ RLTAVRPEPT PAAVAALECD RPVIAAVNGA AVGWGMELTL FADIRIASEQ AKFGEIFIKR GLITDVGGLW RLPAIVGPAK AAELLFTGDV IGAREAERIG LVTEVTPHDQ LMERALAMAD RIAVNAPLAL RFMKEGLRRT AYGDLREIGS WVSGTLGKLF ETEDHREGVK SFLEKRAPVF KGR
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