Gene Plav_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1567 
Symbol 
ID5455298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1705715 
End bp1706536 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID640877140 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412843 
Protein GI154252019 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.870859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG CGGAAAGGAT ATCCCCGGCG GACTTCACCT GCGTTCTCTA TGAAGTGCGC 
AATCATGTCG CCATTATCAC CATCAATCGC CCGGAACGGC GCAATGCGCT CAATCGCCGT
GCCTATGATG AAGTGGAGGC GGCGTTCCGC GCGGCTTCCG CCGATACGGA TGTCCGCTGC
GTGGTTGTCA CCGGTTCCGA CCCTGCTTTC TGCTCTGGCG AAGACGTGAA GGAGATGATG
ACGGGCGAGG AACACGGAAA AAGCGTTCAG CGCCTCACCG CTGTCCGGCC GGAGCCTACC
CCTGCGGCCG TCGCCGCGCT TGAATGCGAC AGGCCAGTCA TTGCGGCCGT CAACGGCGCC
GCTGTCGGGT GGGGCATGGA GCTCACGCTC TTCGCCGATA TTCGCATTGC CTCGGAACAG
GCGAAGTTCG GTGAGATATT CATCAAGCGG GGGCTTATCA CGGATGTCGG CGGCCTCTGG
CGGCTGCCGG CCATCGTAGG ACCGGCAAAA GCGGCGGAGC TACTCTTTAC AGGCGATGTC
ATCGGCGCGA GAGAAGCCGA GCGTATCGGC CTCGTAACGG AGGTAACGCC GCATGACCAG
CTCATGGAGC GGGCGCTTGC GATGGCCGAT CGCATTGCGG TCAATGCGCC GCTGGCACTC
CGCTTCATGA AGGAAGGGCT CCGCCGCACC GCCTATGGCG ACCTCCGCGA AATCGGAAGC
TGGGTCAGCG GCACGCTGGG CAAGCTTTTC GAAACAGAGG ATCATCGGGA AGGCGTAAAA
AGCTTCCTGG AGAAACGTGC TCCGGTTTTC AAAGGACGAT GA
 
Protein sequence
MAKAERISPA DFTCVLYEVR NHVAIITINR PERRNALNRR AYDEVEAAFR AASADTDVRC 
VVVTGSDPAF CSGEDVKEMM TGEEHGKSVQ RLTAVRPEPT PAAVAALECD RPVIAAVNGA
AVGWGMELTL FADIRIASEQ AKFGEIFIKR GLITDVGGLW RLPAIVGPAK AAELLFTGDV
IGAREAERIG LVTEVTPHDQ LMERALAMAD RIAVNAPLAL RFMKEGLRRT AYGDLREIGS
WVSGTLGKLF ETEDHREGVK SFLEKRAPVF KGR