| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1566 |
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| Symbol | |
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| ID | 5454223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1704882 |
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| End bp | 1705685 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877139 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001412842 |
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| Protein GI | 154252018 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTG CTTTCAAGGA CCAGGTGCTC GCCGGCAAGA CAGCTTTCGT CGCCGGCGCA
TCGAGCGGGA TCAATCTCGG CATTGCGCAG CATTTCGCGC GCGCCGGCGC GAAGATCGCG
CTTATCAGCC GCAGCCACGA AAAGATCACC GCAGCGGCAA AGACGATCAG CGACGAAGGC
TTTGAAGCGA TCGGGATGGC CGCCGATGTG CGGGATTTCA ATTCGGTCGA CACAGCGATG
AAACAGGCGA ACGACAGGTT CGGCAATTTC GATATCGTGA TTTCCGGTGC GGCGGGCAAT
TTCGTGGCGC CGGCGCTCGG CATGTCGTCC AATGGCTTCA AGACGGTCGT GGATATCGAC
CTCATCGGTA CATTCAACGT GCTGCGGGCT TCCTTTCAGT ATCTGACGCG GCCCGGCGCT
TCGCTCATCT CGATCACGGC ACCGCAGGCG GTCAACCCGT CGCTTTTCCA GGCGCATGTC
TGCGCCGCGA AGGCGGGCAT CAACATGCTG ACGAAATGCC TTGCGATGGA GTGGGGCCCG
GCCGGTGTAC GGGTGAATGC AATATCCCCG GGTCCGATTG CCGATACCGA GGGCATGGCG
CGCCTTGCGC CGACGCCTGA AATGGAAAAG GCGATCAAAT CCCGCATCGC GCTGCGCGAT
TATGGCACCA AGACGGATAT CGGCGACATG GCGCTGTTTC TCTCCACCGA TAACGCCAAA
TATATCACCG GCACCATTGT CGATTGCGAC GGCGGGTCGA AACTCGGCGA TGCCGGTACG
GATGCGCTTG GCGAATTCAA GTAG
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| Protein sequence | MTSAFKDQVL AGKTAFVAGA SSGINLGIAQ HFARAGAKIA LISRSHEKIT AAAKTISDEG
FEAIGMAADV RDFNSVDTAM KQANDRFGNF DIVISGAAGN FVAPALGMSS NGFKTVVDID
LIGTFNVLRA SFQYLTRPGA SLISITAPQA VNPSLFQAHV CAAKAGINML TKCLAMEWGP
AGVRVNAISP GPIADTEGMA RLAPTPEMEK AIKSRIALRD YGTKTDIGDM ALFLSTDNAK
YITGTIVDCD GGSKLGDAGT DALGEFK
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