| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1562 |
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| Symbol | |
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| ID | 5455870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1700671 |
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| End bp | 1701519 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877135 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_001412838 |
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| Protein GI | 154252014 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.41201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCT GGCTCAGCGG CGCAATAATG GAAGCGGAAG CAGCGCGCAT AGATCCCGCG
GACCGTGGCT TTCTGCTCGG CGACGGGCTT TTCGAAACGA TGCTGGCGCG GAACGGGCAT
ATCTCGTTCT TCGAAGAGCA CCTGATGCGG CTGGTGAGCG GCGCCGACAT GATCGGCATC
GAAATGCCGT TCGGACCCGT GCATGTCGAG GAAGCCTGCA AGGCATTGCT CGAGGAGAAT
AAACTCGACT CGGCGCCGCG CGCGTCGCTG CGGCTGACGC TGACCCGCGG TCCCGGCCCG
CGCGGCCTCG CCCTGCCTGC AAACGCATCG CCGACCGTCA TGATTTCCTG TGCGGCGGCG
CCCAATCCGC CGGAGCGTCT GAACGCGATT ATCGCCACGC CGCGCCGTAA CCCCTGGTCG
CCCGCCGCGC GGCTGAAAGC CTTGCCCTAT CTCGACAATG TGCTCGCGAA GGAAGAAGCG
CGGATGAAGG GTGCGGATGA AGCATTGATG CTCGAAACAA GCGGCAACCT GGCCTGCGCC
AGCGCGGCCA ATATTTTTTT GTGGGAAGGC GAGAGACTTA TCACCCCCTC GGAGCGCTGC
GGCATACTGC CCGGCATTAC GCGGGCGGCG CTGCTCGAAC TCGCGCCCGA TATGGGGATA
GAAACAAGCG AAGACGAAAT TGCACCGGCC CGCATCGCTC ATGCATCGGG CGCCTTTCTC
ACCAATTGCC TGATGGGGCT GGTGCCGCTG GCGCGGATTG ACGGACGGGT TATCCCCGCG
CACCCGATGA CCGCGCGTCT CGCCGCGGCC TACGAGCTCC TGCTCGATGC CGCGGACGAG
AACGACTGA
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| Protein sequence | MKIWLSGAIM EAEAARIDPA DRGFLLGDGL FETMLARNGH ISFFEEHLMR LVSGADMIGI
EMPFGPVHVE EACKALLEEN KLDSAPRASL RLTLTRGPGP RGLALPANAS PTVMISCAAA
PNPPERLNAI IATPRRNPWS PAARLKALPY LDNVLAKEEA RMKGADEALM LETSGNLACA
SAANIFLWEG ERLITPSERC GILPGITRAA LLELAPDMGI ETSEDEIAPA RIAHASGAFL
TNCLMGLVPL ARIDGRVIPA HPMTARLAAA YELLLDAADE ND
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