Gene Plav_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1553 
Symbol 
ID5456589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1694612 
End bp1694965 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID640877126 
Producthypothetical protein 
Protein accessionYP_001412829 
Protein GI154252005 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.672305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCGCC AGAATATTCC CCGCGCCCGC CAGCTGCGTG TCGACGCGAC AGACGCCGAA 
GCCCGCCTCT GGCTGCACCT CCGCAATCGC ATGCTGGGCG GCTTCAGGTT CCGCCGACAG
TTCTCCGTCG GCCCCTATAT CGCCGATTTT GTCTGCGCCG AACGCAAGTT GATCGTCGAA
CTCGATGGAA GTCAGCATGC GGACAATCCT GCCGATGAAC GCCGCACGCG TTTTCTTGAG
TTGCGCGGCT ACCGCGTCAT CCGCTTCTGG AATCCCGACG TGCTCGCGAA TACGGAAGGC
GTGCTTGAGA TGATCCTCCT CGAACTGCAG AAGGCCCCTC ACCCTTCCCG TTGA
 
Protein sequence
MKRQNIPRAR QLRVDATDAE ARLWLHLRNR MLGGFRFRRQ FSVGPYIADF VCAERKLIVE 
LDGSQHADNP ADERRTRFLE LRGYRVIRFW NPDVLANTEG VLEMILLELQ KAPHPSR