Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1547 |
Symbol | |
ID | 5454588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1688500 |
End bp | 1689228 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877120 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001412823 |
Protein GI | 154251999 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA AAGAACTGGA GGCCGCGACC GGAATCGGCC GTGAGACCAT CCGCTACTAT ATTCGCGAGG GCCTGTTGCC CGAGCCGGTA CGGCCGAAGC GCAATGTCGC GGCTTACGGG CGCGAGCATG TGAAGCGCAT CAATCTCATC CGCCGCCTGC AGCAGGAGCG CCATTTGCCG CTCTCCGTCA TCAAGGTCAT CGTCAATTCC GAGATGGGTG AGCCGGCGCA GGGCTTCGAG GCGCTGATCG GCCTTGAGGT TGCGATGGGA CCGCTTCTCT CGGACGGACG CAACCTTGCG CCGCAAAAAC TCGCCGACGT CGCGAAGGCA ACGCGGCTTA CGGTCGACGA GATTCGCAAA TTCGCCGGAA TAGGTCTCAT CCATATCGAG ACCCGCGACG GTGGCGAGTG GCTCAACCAG CGCAATGTCC GCATCATGGA AATCATCGCG CAGACAAGGG CAGACGGCTT CACGCCCGAT ATCGGCTACA CCGTCGAGAG CTATGAAATC TATCCGCAGA TGATCGAGCT GCTCGCGCGC CGCGCCGTGG TCGGCTTCTA TTCGCGCCTC GGCGACAAGC TCGACCAGCC CGCCGCCGCC AAGCTCGCCG TCAACGGCAT CCGTACGCTG AGCGAAATGG TGCCGCTCAT GCTGATCGAC AAGATCGTCC GCGATGTCGA AAAGATCAGT GCCAGCGGCG TTCTGCCGAC GGCGGAAGAG GACGTTTGA
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Protein sequence | MKMKELEAAT GIGRETIRYY IREGLLPEPV RPKRNVAAYG REHVKRINLI RRLQQERHLP LSVIKVIVNS EMGEPAQGFE ALIGLEVAMG PLLSDGRNLA PQKLADVAKA TRLTVDEIRK FAGIGLIHIE TRDGGEWLNQ RNVRIMEIIA QTRADGFTPD IGYTVESYEI YPQMIELLAR RAVVGFYSRL GDKLDQPAAA KLAVNGIRTL SEMVPLMLID KIVRDVEKIS ASGVLPTAEE DV
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