Gene Plav_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1547 
Symbol 
ID5454588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1688500 
End bp1689228 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640877120 
ProductMerR family transcriptional regulator 
Protein accessionYP_001412823 
Protein GI154251999 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA AAGAACTGGA GGCCGCGACC GGAATCGGCC GTGAGACCAT CCGCTACTAT 
ATTCGCGAGG GCCTGTTGCC CGAGCCGGTA CGGCCGAAGC GCAATGTCGC GGCTTACGGG
CGCGAGCATG TGAAGCGCAT CAATCTCATC CGCCGCCTGC AGCAGGAGCG CCATTTGCCG
CTCTCCGTCA TCAAGGTCAT CGTCAATTCC GAGATGGGTG AGCCGGCGCA GGGCTTCGAG
GCGCTGATCG GCCTTGAGGT TGCGATGGGA CCGCTTCTCT CGGACGGACG CAACCTTGCG
CCGCAAAAAC TCGCCGACGT CGCGAAGGCA ACGCGGCTTA CGGTCGACGA GATTCGCAAA
TTCGCCGGAA TAGGTCTCAT CCATATCGAG ACCCGCGACG GTGGCGAGTG GCTCAACCAG
CGCAATGTCC GCATCATGGA AATCATCGCG CAGACAAGGG CAGACGGCTT CACGCCCGAT
ATCGGCTACA CCGTCGAGAG CTATGAAATC TATCCGCAGA TGATCGAGCT GCTCGCGCGC
CGCGCCGTGG TCGGCTTCTA TTCGCGCCTC GGCGACAAGC TCGACCAGCC CGCCGCCGCC
AAGCTCGCCG TCAACGGCAT CCGTACGCTG AGCGAAATGG TGCCGCTCAT GCTGATCGAC
AAGATCGTCC GCGATGTCGA AAAGATCAGT GCCAGCGGCG TTCTGCCGAC GGCGGAAGAG
GACGTTTGA
 
Protein sequence
MKMKELEAAT GIGRETIRYY IREGLLPEPV RPKRNVAAYG REHVKRINLI RRLQQERHLP 
LSVIKVIVNS EMGEPAQGFE ALIGLEVAMG PLLSDGRNLA PQKLADVAKA TRLTVDEIRK
FAGIGLIHIE TRDGGEWLNQ RNVRIMEIIA QTRADGFTPD IGYTVESYEI YPQMIELLAR
RAVVGFYSRL GDKLDQPAAA KLAVNGIRTL SEMVPLMLID KIVRDVEKIS ASGVLPTAEE
DV