| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1545 |
|---|
| Symbol | |
|---|
| ID | 5455125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1686430 |
|---|
| End bp | 1687602 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877118 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001412821 |
|---|
| Protein GI | 154251997 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG CCTATATCGT CGCCGCCGCG CGCACTGCGG GCGGCCGCAA AGGCGGCAAA
CTGAAGGATT GGCACCCGGC CGATATGGGC GGCAAGGTCA TCGACGAGCT GGTGAAGCGC
ACAGGCGCCG ATCCCGAGCT CATCGAGGAC GTCATTGTCG GCTGCGTCGA CCAGGCGGGC
GAGCAGGGCA TGAACATCGC GCGCAACGCG GTGCTCGCGT CCGGCCTTCC GGAGAGCGTT
CCGGCAACCT CCGTCGACCG CCAGTGCGGT TCCTCGCAGC AGGCGCTTCA TTTTGGCGCG
CAAGCCGTCA TGTCGGGCGC GATGGATGTC GTCATCGCGG CGGGCATCGA AAGCATGACG
CGTGTGCCGA TGGGCATGCC GATCTCGCTC CCCTTCAAGA ACGGTTTCGG CATCTACAAG
AGCCCGAACA TCGAGGAGCG TTATCCGAAC ATCCAGTTCA GCCAGTTCGC CGGTGCTGAA
ATGATGGCCA AGAAATACGG CCTCACCAAG GACCAGCTCG ACGAGTTTGC CTATAACAGC
CACCAGAAGG CGATTGCGGC CACCCAGGCC GGTCTCTTCG ACGAGGAAAT CGTGCCGCTC
GAAATTGCGC TCGAGGACGG CTCGAAGGAC ATGCACAAGG TCGACGAAGG CATTCGCTTC
GACGCCAATC TCGAAGCGAT CAAGAATGTG AAGCTCCTCG TCGAAGGCGG CGCCATCACG
GCCGCTTCCT CCTCGCAGAT CTGCGACGGC GCGTCCGGCG TCATGATCGT CAACGAAAAG
GGCCTGAAGG CGCTCGGCGT CGAGCCGCTC GCCCGTATCC ACCACATGAC GGTGGTCGGC
GGCGATCCGG TCATCATGCT CGAGGCGCCG ATCCCCGGCA CCGAGAAGGC GCTGAAAAAG
GCCGGCATGA AGATCGAGGA TATCGATCTT TATGAAGTGA ACGAGGCCTT CGCTTCCGTC
CCCGCCGCCT GGCTCCAGGT GCTCGGTGCG GACCCGGCCC GGCTCAACGT CAATGGCGGC
GCCATCTCGC TCGGCCATCC GCTCGGCGCT TCCGGCACCA AGCTCATGAC GACGCTCGTC
CACGCGCTGA AGAACAAGAA AAAGCGCTAC GGCCTGCAGA CCATGTGCGA AGGCGGCGGC
CTCGCCAATG TCACGATTGT CGAGCGTCTC TGA
|
|---|
| Protein sequence | MAEAYIVAAA RTAGGRKGGK LKDWHPADMG GKVIDELVKR TGADPELIED VIVGCVDQAG
EQGMNIARNA VLASGLPESV PATSVDRQCG SSQQALHFGA QAVMSGAMDV VIAAGIESMT
RVPMGMPISL PFKNGFGIYK SPNIEERYPN IQFSQFAGAE MMAKKYGLTK DQLDEFAYNS
HQKAIAATQA GLFDEEIVPL EIALEDGSKD MHKVDEGIRF DANLEAIKNV KLLVEGGAIT
AASSSQICDG ASGVMIVNEK GLKALGVEPL ARIHHMTVVG GDPVIMLEAP IPGTEKALKK
AGMKIEDIDL YEVNEAFASV PAAWLQVLGA DPARLNVNGG AISLGHPLGA SGTKLMTTLV
HALKNKKKRY GLQTMCEGGG LANVTIVERL
|
|---|
| |