| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1536 |
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| Symbol | |
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| ID | 5454080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1675966 |
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| End bp | 1677069 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877109 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001412812 |
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| Protein GI | 154251988 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGGT TTCCGCGTTT TGTACTTGTC GCGGTTTTGG GGGCTTTTGC CCTTGCAGGA
TGCGGCGAGG AAGCCAGCCA AACCGCCGAG GCGGAAACGG CCATCCCCGT CCTGGTAGCG
GAGGTGCGGA CGGCTCCCGA AGCGGGCTTC GTCACCGCCT ATGGCCTCGT CCGGCCGGAC
CGGGAAGCCG CCCTCTCCTT CAAGATTTCC GGGCTCGTGC GGACCATCGC CGTCGATGCC
GGCGACATCG TCCGCAAGGG CGACACATTG GCCGAACTCG ACATGCGCGA GATCGATGCC
GATGCGAGGC GCGCCAATGC CGCCGCCATC AAGGCGAAGC GCGACGTCGA CCGGATTGCG
CCGCTCCTCG AAAATGGCTT TGTGAGCCGA CAGCGCATGC AGGACGCGCA GACCGCCTAC
GACCTGGCGC TGGCCGAGCG CAGCCGCGTC GACTTCAACC GCTCGCTTTC AAGGATCGTG
GCGCCCGCCG ACGGCGTGGT CCTGTCGCGC CTTTCCGAGC CGAACGAAAT CGTCAATCCC
GGCCAGCCGA TCCTGACTGT GAGCCAGGGC GGCGGCGGCT TCATATTGAA GGCGGGGCTT
GCCGACCGCG ACATGGCACG CATCCAGCTC GACGCCCGCG CCTCCGTGAC GCTCGACGCC
TTTCCGGGCG AGAAGCTCGC CGGCACCGTC CGCCGCATTG GTGCGGCAAG CGAGGCGCGC
ACCGGGACAT TCGAAATCGA GATCGCGCTC GATAACGCGC CGCCCGGCAC CGCGAGCGGT
TTCATCGGCG TAGCGCAGAT TGAACCGGCG GACGAAAATG CGGCGGCTCT CGCCGTTCCG
GCGACCGCAA TCCTTGAAGG GCATGGCGCG GTCGCCAATG TCTATCTGCT CGACCGGCCA
AGCATGACGG TGCGCCAGAA ACGCATCGGC ATCGGCCGCA TCAGCGGCGA CGAGGTAATC
GTCACGGACG GCCTCAAGGC AGGCGACCAG GTGGTGAGCG CGGGGGCGCC CTATTTACGC
GAAGGCGCGA AAGTCCGCGT GGTGACTGAC CTGAAAGCGG CACGTGCCGA AACGGCGTCC
GAGGACGAGG CCGCTCGTCC ATGA
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| Protein sequence | MTGFPRFVLV AVLGAFALAG CGEEASQTAE AETAIPVLVA EVRTAPEAGF VTAYGLVRPD
REAALSFKIS GLVRTIAVDA GDIVRKGDTL AELDMREIDA DARRANAAAI KAKRDVDRIA
PLLENGFVSR QRMQDAQTAY DLALAERSRV DFNRSLSRIV APADGVVLSR LSEPNEIVNP
GQPILTVSQG GGGFILKAGL ADRDMARIQL DARASVTLDA FPGEKLAGTV RRIGAASEAR
TGTFEIEIAL DNAPPGTASG FIGVAQIEPA DENAAALAVP ATAILEGHGA VANVYLLDRP
SMTVRQKRIG IGRISGDEVI VTDGLKAGDQ VVSAGAPYLR EGAKVRVVTD LKAARAETAS
EDEAARP
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