Gene Plav_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1521 
Symbol 
ID5453415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1658779 
End bp1659237 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID640877094 
Producthypothetical protein 
Protein accessionYP_001412797 
Protein GI154251973 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA TTTACGTCGA TGCGGATGCC TGCCCGGTCA AGGACGAGGC GGTGAAGGTC 
GCCGAGCGGC ATGGGCTCAC CGTCCATATC GTCAGCAATA GCGGCATGCG GCCGACCGGC
CATCCGCTGG TGAAGCAGGT CGTGGTGCCC GCCGGGCCGG ATGTCGCGGA TGACTGGATC
GCCGAGCGGG CAGGGCCGCA AGACATTGTA ATCACTGGCG ATATTCCGCT TGCCGCCCGC
GCGCTGGAGA AGGGCGCCGC CGCGCTCGGT CATGATGGAC GGCCCTTCAC GCAGGACAGT
ATCGGCATGG CGCTCGCCAT GCGCGACCTG ATGCGGGAGC TGCGTGAGAC GGGTCAGTCG
AAGGGCGGCG GTCCTGCCTT TTCGAAGGAG GACCGCTCGC GTTTTCTGCG TTCGCTGGAA
GACACGGTGC AGGCGATCAG GCGGCGCCCG CCGCCTTGA
 
Protein sequence
MTEIYVDADA CPVKDEAVKV AERHGLTVHI VSNSGMRPTG HPLVKQVVVP AGPDVADDWI 
AERAGPQDIV ITGDIPLAAR ALEKGAAALG HDGRPFTQDS IGMALAMRDL MRELRETGQS
KGGGPAFSKE DRSRFLRSLE DTVQAIRRRP PP