Gene Plav_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1513 
Symbol 
ID5454927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1651561 
End bp1652100 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID640877086 
Producthypothetical protein 
Protein accessionYP_001412789 
Protein GI154251965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0464514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA TCCGGTATGC ACCGGGCTGG AAGAAGAACG ACACCGCCCT CGAGGCGGCG 
GCGGCGGCGC TGTGGCACGA ATATGGCGCG CTGCCGCATG GCGTTACGCC CGAGGCGCGG
GCGAAGGAAA TCTGCTGCGC CGCTTTTGAC GGCGACAGGA TGATCGGCGT GTCGACAATC
GACATCCGCC CCTATCCGCC GCTCCGCAAC AAGCGCTTCG GCTTTCTGCG CGTCTTCACG
CGGCCAGACT ATGAGCAGCA GGACGTTGCC ATCGGCCTTG CATCGCGGTG CCGGGACCTG
CTGGAGGAAT GGTCGATCGC CCATCCGCAG GCGGGCCTCG CCGGCATGGC GGCGATCTAC
CAGTCGCCGA AACTCGGCCA TTACCCCATC GGCGAATCGG GCCTGACCCT GATCGGCTAT
ACGCCGGAAG GCTTTCAGGT GCGCGTCGTC TGGTTCAACC ACCTGCCGCT GACGGAGGGT
TATCCCGTCC GCCTGCACGC AGAAAACGAA CAATCGAAAA CAGGAAAGAA AGCAGTATGA
 
Protein sequence
MNNIRYAPGW KKNDTALEAA AAALWHEYGA LPHGVTPEAR AKEICCAAFD GDRMIGVSTI 
DIRPYPPLRN KRFGFLRVFT RPDYEQQDVA IGLASRCRDL LEEWSIAHPQ AGLAGMAAIY
QSPKLGHYPI GESGLTLIGY TPEGFQVRVV WFNHLPLTEG YPVRLHAENE QSKTGKKAV