| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1508 |
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| Symbol | |
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| ID | 5453652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1640873 |
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| End bp | 1643038 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877081 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001412784 |
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| Protein GI | 154251960 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.889883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGT CAACAAGCGG CAAGTGTCCA GTGATGCATG GCTCGATGAC CACCGCCGAA
CGCTCGGTTA CGGAGTGGTG GCCCAATGCG CTGAACCTCG ACATTCTCCA TCAGCACGAC
ACCAAGCCCA ACCCGATGGG CAAGGACTTC GACTATCGCG AAGAACTGAA GAAGCTCGAC
GTCGCGGCGC TGAAAAAGGA TCTTCAGGCG CTGATGACGG ACAGCCAGGA CTGGTGGCCG
GCCGACTGGG GCCACTATGG CGGCTTGATG ATCCGCATGG CCTGGCATTC GGCAGGCTCT
TACCGGCTGT TCGACGGCCG CGGCGGCGGC GGCACCGGCA ACCAGCGTTT CGCGCCCCTC
AACTCCTGGC CGGACAATGG CAATCTCGAC AAGGCGCGGC GCCTGCTCTG GCCGATCAAG
AAGAAGTACG GCAACAAGCT GAGCTGGGCC GACCTCTACA TCCTTGCCGG GAACGTCGCC
TATGAATCCA TGGGGCTGAA GACCTTCGGC TTCGCCTTCG GGCGCGAGGA CATCTGGCAC
CCGGAGAAGG ACGTCTATTG GGGCTCCGAG AAGGAGTGGC TGGCGGAAAG CGTGCTCCGC
TACGCGAACG AGGAAGACCC GGAATCGCTC GAAGCGCCGC TGGGCGCCGT CCATATGGGC
CTCATCTATG TCAACCCGCA GGGCCGCGAC GGCAAACCCG ATCCGCTGAA ATCCGCGCAT
GACGTGCGCG TGACCTTCAA GCGCATGGCG ATGAACGACG AGGAGACGGC GGCGCTCACC
GCCGGCGGCC ACACCGTCGG CAAGGCCCAT GGCAACGGGC TCGAATCCAA TCTCAGCGCG
CCGCCCGAGG CCGCCGACAT CGAGGAACAG GGCTTTGGTT GGGTGAACCA CAAGACCCGG
GGCGTCGGCC GCGATACGGT GACGAGCGGC CTCGAAGGCG CCTGGACGAG CAAGCCGACT
ACCTTCGACA TGGGCTATTT CGACATGCTG TTCGGCCATG AATGGGAGCT GAAGAAGAGC
CCCGCCGGCG CCTGGCAGTG GCAGCCCATC GACATCAAGG AAGAAGACAT GCCGGTCGAT
GTGGAGGATC CCTCGATCCG CCGCATGCCG ATCATGACCG ATGCCGACAT GGCGATGAAG
GTGGACCCGA TCTACCGCGA AATCTGCGAG CGGTTCCGCA AGGACCCGGA ATATTTCAAG
GACACCTTCG CGCGGGCCTG GTTCAAGCTC ACCCATCGCG ACATGGGCCC GAAGGTCCGC
TATGTCGGAC CGGAAGTGCC GGCAGAAGAC CTGATCTGGC AGGACCCCAT CCCCGCCGGC
AATACGAGCT ACGACGTCGG CGCGGTGAAG GCAAAGATCG CGGCCTCGGG CCTTTCCGTC
TCCGAGCTGG TCTCGACCGC ATGGGACAGC GCCCGCACCT ATCGCGGCTC CGACATGCGC
GGCGGCGCGA ACGGCGCCCG CATCCGCCTC GCCCCCCAGA AGGACTGGGT AGGCAACGAG
CCGGAGCGCC TGAAGAAGGT GCTCTCCATG CTCGAACCGA TCGCCAAGGC AACGGGCGCG
AGCCTCGCCG ATGTCATCGT GCTCGCGGGC AATGTCGGCG TCGAACAGGC GGCAAAGGCA
GCGGGCTTCG ACATTGCCGT GCCCTTTGCA CCGGGACGCG GCGACGCGAG CGCCGAGCAG
ACGGACGCGG AGAGCTTCGA GGCGTTGGAG CCGCTCGCCG ATGCCTATCG CAACTTCCTG
AAGCGGGACT ACGAGTTGCC GCCGGAAGAG TTGATGCTCG ACCGCACGCA GCTGATGGGG
CTCACCGGTC CCGAGATGAC GGTCCTTGTC GGCGGCATGC GCGTCATGGG TACGAACCAT
GGCGGCACCA GGCACGGCGT CTTCACCGAC CGCGAAGGCG CGCTGACGAA CGACTTCTTC
GTCAACCTGA CCGACATGGG CAATAGCTGG GTGAAGAATG GCGGCCACTA CGACGTGCGC
GACCGCAAGA CAGGCAAGAC GAAGTGGACG GCAACCCGCG TCGACCTCGT CTTCGGCTCG
AACTCGATCC TGCGCGCCTA TTCGGAAGTC TATGCGCAGG ACGACGCGAA GGAAAAGTTC
GTGAAGGACT TCGTGGCCGC CTGGACGAAG GTCATGAACG CCGACCGCTT CGACCTGAAG
AAGTAA
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| Protein sequence | MNTSTSGKCP VMHGSMTTAE RSVTEWWPNA LNLDILHQHD TKPNPMGKDF DYREELKKLD
VAALKKDLQA LMTDSQDWWP ADWGHYGGLM IRMAWHSAGS YRLFDGRGGG GTGNQRFAPL
NSWPDNGNLD KARRLLWPIK KKYGNKLSWA DLYILAGNVA YESMGLKTFG FAFGREDIWH
PEKDVYWGSE KEWLAESVLR YANEEDPESL EAPLGAVHMG LIYVNPQGRD GKPDPLKSAH
DVRVTFKRMA MNDEETAALT AGGHTVGKAH GNGLESNLSA PPEAADIEEQ GFGWVNHKTR
GVGRDTVTSG LEGAWTSKPT TFDMGYFDML FGHEWELKKS PAGAWQWQPI DIKEEDMPVD
VEDPSIRRMP IMTDADMAMK VDPIYREICE RFRKDPEYFK DTFARAWFKL THRDMGPKVR
YVGPEVPAED LIWQDPIPAG NTSYDVGAVK AKIAASGLSV SELVSTAWDS ARTYRGSDMR
GGANGARIRL APQKDWVGNE PERLKKVLSM LEPIAKATGA SLADVIVLAG NVGVEQAAKA
AGFDIAVPFA PGRGDASAEQ TDAESFEALE PLADAYRNFL KRDYELPPEE LMLDRTQLMG
LTGPEMTVLV GGMRVMGTNH GGTRHGVFTD REGALTNDFF VNLTDMGNSW VKNGGHYDVR
DRKTGKTKWT ATRVDLVFGS NSILRAYSEV YAQDDAKEKF VKDFVAAWTK VMNADRFDLK
K
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