| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1504 |
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| Symbol | |
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| ID | 5454509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1635119 |
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| End bp | 1637863 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877077 |
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| Product | ABC transporter related |
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| Protein accession | YP_001412780 |
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| Protein GI | 154251956 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.13475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCC CTCCGGCCGT CGCGCGTCTT CGGGATGTCA CGCTGCAATA TGGCCGGCAA
TATGCACTGC GGAACGTCAC GCTCGATATT CCCGAAGGCG GAATGGTCGG ACTGATCGGC
CCGGACGGGG TCGGCAAATC GAGCCTTCTC TCGCTCGTCG CCGGTGCCCG CGCGCTGCAG
CAGGGAAGCC TTGAGGTTTT CGGCGGCGAC ATGCGCAAGC CCGATCATCG CCGTGCCATC
GGCCCGCGCA TCGCCTACAT GCCGCAGGGC CTCGGCAAGA ACCTCTATCC CACTCTGTCC
GTCTTCGAGA ATATCGATTT CTTCGGCCGT CTCTTCGGTC ACGGTCGCGC GCAGCGTGAA
CGCCGGATTG CGGCACTTCT CGAAAGCACG GGCCTTGCGC CCTTCGCGGA CCGCCCGGCG
CAGAAACTTT CAGGCGGCAT GAAGCAGAAG CTCAGCCTGT GCTGCGCGCT GATCCACGAT
CCGGATCTGC TTGTGCTCGA CGAGCCCACC ACGGGTGTCG ATCCCTTGTC GCGCCGCCAG
TTCTGGGAGC TGATCCAGCG TATCCGCGAC GAGCGCCCGC AAATGAGCGT GGTCGTCGCA
ACCGCCTATA TGGAGGAGGC GGACCGGTTC GACTGGCTGG CGGCGATGGA TGCAGGGCAG
GTGCTTGCGA CGGGGACGCC TGCCGAGCTC CGCGCCCGAA CCGGGGCCGC CTCGCTCGAA
GCGGCCTTCA TCGCGCTGCT GCCGGAAGAA AAGCGCCGCG AGCATCGCCC CGTGGACATT
CCGCCACGCG ATGCCTCGGC TGACGGCGAG ATCGCTATCG AGGCACGCGG CCTCACCATG
CGTTTCGGTG ATTTCACGGC GGTCGACAAT GTGAGTTTCC GGATCGAACG CGGCGAGATT
TTCGGCTTCC TGGGCTCGAA TGGCTGCGGC AAGACGACGA CGATGAAGAT GCTGACGGGC
CTTCTGCCCG CGAGCGAGGG TCAGGCATGG CTGTTCGGCC AGCCGGTCGA CAGTTACGGC
ATCGGCATCC GCCGCCGCGT CGGCTATATG TCGCAAGGCT TCTCGCTCTA TACCGAACTC
ACGGTGCGGC AGAATCTCGA GCTTCACGCG CGGCTCTTCG ATGTGCCCGC GAGTGATATC
CCGTCGCGTA TCGACGAGAT GATATCGCGC TTCGGCCTTG CCGACGTCAT CGATCTCCTG
CCGGAGAAGT TGCCGCTCGG CCAGCGCCAG CGCCTCTCTC TTGCGGTTGC CATGATCCAC
CGGCCGGAAA TGCTGATCCT CGACGAACCC ACATCCGGCG TCGATCCGGT CGCGCGCGAC
AATTTCTGGC GCATGCTGGT GGAGCTTTCT CGGCGCGACA AGGTCACGAT CTTCATTTCC
ACCCATTTCA TGAACGAGGC GGAGCGCTGC GATCGCATAT CGCTGATGCA TGCCGGCCGC
GTTCTCGTCA GCGACACGCC CGCGAACATC GTCGAAAGCC ATGCCGCCGC CACGCTGGAA
GATGCCTTTA TCGCCTGCCT CAAGGAGGCT GGTGCCGGCG GCGAGGTCAG CGACGCACCG
CTCGATCACG ATATACTGGC GCAGGGCGAG GCGCAGGTGT CCGAGGAGAA GGCAACGCGA
CGCCGCTTCA GTCCAGGCCG CATGTTCAGC TACACGCGGC GCGAGGCGCT CGAACTGCAA
CGAGATCCGG TCCGTGCCAC GCTCGCGCTG ATCGGCAGTG TGATGTTGAT GTTCGTGATC
GGCTACGGCA TCAATCTCGA TGTCGAGGAT ATGAGTTTCG CCGTTCTCGA CCGGGACCGC
ACGACGACAA GCCGCGACTA CACGCTGAAT ATCGCGGGGT CGCGCTATTT CACGGAAGAA
CCCGAGATTG TCGACTATGC CGATCTGGAC AGGCGTATGC GCGCGGGCAA GCTTTCTCTT
GCCATCGAAA TACCGCCGGA TTTCGCGCGT GACATTGCAC GAGGGCGGCA GGTCAAGATA
GGTGCCTGGA TCGACGGCGC CATGCCGACG CGCGCCGAGA CGATTCAGGG CTATGTCGCG
GGCATGCATT CGCAATGGCT GAGAATGAAG GCGGTGGAGG AGGGCATTCC GGTGACAAGC
CTCGTCACCA TCGAAACGCG CTTTCGTTAC AATCCCGATG TGAAGAGCAT CGTTGCGATG
GTGCCTGCGG TGATACCGCT CCTCCTGATG TTGATCCCGG CCATGCTCGC CGCGCTCAGC
GTCGTGCGCG AAAAGGAGCT CGGCTCCATC GTCAATCTCT ATGTGACGCC GGTCACGCGG
CTCGAGTTTC TGCTCGGCAA GCAGCTTCCC TATGTCGCGC TCGCCATGCT GAATTTCGTG
CTGCTGGCTC TCTTCGCGGT CCTGTTCTTC GGCGTGCCGG TGAAGGGAAG CGTCCTCACG
CTTACGGCGG CGACGTTTCT CTATGTCCTG TCCTCCACCG CCATGGGCCT CCTGATCTCG
TCTCTCATGC GCAGCCAGAT CGCCGCTATT TTCGGCACCG CGATCCTCAC CATCCTGCCG
GCCGCGCAAT TCTCCGGCCT CATCGATCCC GTCTCCTCGC TCGAAGGTGT GGGGGCGCTG
ATCGGGCAGG TCTATCCGAC GACGTATTAC CTTACCATCG TGCGCGGCAC CTTTTCCAAG
GCGCTCGATT TCAGCGATCT GCAGGCTTCC TTCGTGCCGC TTCTCATCGC TGCTCCGGTG
CTGATCTGTC TCAGTGCCTT GTTCCTGAAA AAGCAGGAGC GCTGA
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| Protein sequence | MTAPPAVARL RDVTLQYGRQ YALRNVTLDI PEGGMVGLIG PDGVGKSSLL SLVAGARALQ
QGSLEVFGGD MRKPDHRRAI GPRIAYMPQG LGKNLYPTLS VFENIDFFGR LFGHGRAQRE
RRIAALLEST GLAPFADRPA QKLSGGMKQK LSLCCALIHD PDLLVLDEPT TGVDPLSRRQ
FWELIQRIRD ERPQMSVVVA TAYMEEADRF DWLAAMDAGQ VLATGTPAEL RARTGAASLE
AAFIALLPEE KRREHRPVDI PPRDASADGE IAIEARGLTM RFGDFTAVDN VSFRIERGEI
FGFLGSNGCG KTTTMKMLTG LLPASEGQAW LFGQPVDSYG IGIRRRVGYM SQGFSLYTEL
TVRQNLELHA RLFDVPASDI PSRIDEMISR FGLADVIDLL PEKLPLGQRQ RLSLAVAMIH
RPEMLILDEP TSGVDPVARD NFWRMLVELS RRDKVTIFIS THFMNEAERC DRISLMHAGR
VLVSDTPANI VESHAAATLE DAFIACLKEA GAGGEVSDAP LDHDILAQGE AQVSEEKATR
RRFSPGRMFS YTRREALELQ RDPVRATLAL IGSVMLMFVI GYGINLDVED MSFAVLDRDR
TTTSRDYTLN IAGSRYFTEE PEIVDYADLD RRMRAGKLSL AIEIPPDFAR DIARGRQVKI
GAWIDGAMPT RAETIQGYVA GMHSQWLRMK AVEEGIPVTS LVTIETRFRY NPDVKSIVAM
VPAVIPLLLM LIPAMLAALS VVREKELGSI VNLYVTPVTR LEFLLGKQLP YVALAMLNFV
LLALFAVLFF GVPVKGSVLT LTAATFLYVL SSTAMGLLIS SLMRSQIAAI FGTAILTILP
AAQFSGLIDP VSSLEGVGAL IGQVYPTTYY LTIVRGTFSK ALDFSDLQAS FVPLLIAAPV
LICLSALFLK KQER
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