Gene Plav_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1490 
Symbol 
ID5456963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1619812 
End bp1620393 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640877064 
Producthypothetical protein 
Protein accessionYP_001412767 
Protein GI154251943 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT CGGCCAGGCG GCCTGATCCC TGGGCTACGG CCCTGACGAT CGCGATGCTG 
CTCATCCCGA TGGCAACGGC GATCGGTCTG CGCTGGATAG GACCCTGGCC CATCATCGTT
GCGCTGGTAG GCTGCATTGC CGCGCGTATT CTCCTTCCGC GGGCGGTGCC CGTTCCTCTT
GCAATGACGA TCTGTCTCGT CGCCGTTGCC GCCGGTGTGC TTGCTGTCGG CACGGTGGCT
CCCGACCTTG CGGCGCGGCT CTATCCCGTC TTTATGAGCG TTACGATGCT TGTCGCCTTT
GTCGTTACCC TGTTCCGCCC TCCGAGCATG ATCGAGCGTT TCGCCCGGAT CATGGAGCCG
GATCTCGACA TGCGGGGTGT GCGCTACACC CGGAAAGTCA CTTATGTCTG GGTGGGGTTT
TTCGCGCTGA ACGCTATCGT CGCCTTGTGG ACCGTGCAAC AGGGCGACCT TTTCTATTGG
GGGCTTTACA ACGGCTTCAT CAGCTATCTT CTTGCAGGCT CTCTCTTCGC AATCGAGTTT
ACCGTACGCC GGCGCGTGCG CGCGCGGAAC GGGCCGGCAT GA
 
Protein sequence
MSFSARRPDP WATALTIAML LIPMATAIGL RWIGPWPIIV ALVGCIAARI LLPRAVPVPL 
AMTICLVAVA AGVLAVGTVA PDLAARLYPV FMSVTMLVAF VVTLFRPPSM IERFARIMEP
DLDMRGVRYT RKVTYVWVGF FALNAIVALW TVQQGDLFYW GLYNGFISYL LAGSLFAIEF
TVRRRVRARN GPA