Gene Plav_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1486 
Symbol 
ID5454631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1617810 
End bp1618571 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID640877060 
Producthypothetical protein 
Protein accessionYP_001412763 
Protein GI154251939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCG ATCGCGCAAT GCCCGGTCCG GCAGGCCTGT CCGCCGTCTT TGTCGAATCC 
TGGGCGGCGA TGCTTGCAGA TGCGCCGGGC GAACCGCCGG TGCGGCTCGG TGCTTGTGCG
GCCGACGCGG ATATTCCGGC GGGGTTGAGA CGCCGCCTTG GTCCGCTTGC GCGCATGGGG
GTTGCCTGCG GCCTCGGCAT AGCTCCGGAA GGAGACGCGG ACATTGTCTT TTGTTCGCGC
TATGGCGACC TCTCGCTCGC GCATCAATTG CTGGCGGCGC TTGTTGCAAC CGAACCGATG
TCGCCTGCGG GGTTTTCGAT GTCAGTGCAT AATGCGGTGC CGGGCGTGCT CGATCTCGCT
CGCAAGGCGC GGATCGGCCA TACGGCGATT GCCGCCGGTG CGCAAACTTT CTCGGCGGGC
CTTGCGGAAG CATGGCTTCG CCTCGGAGAG CGGCCGCATC TCCGGCTTGT GCTTGTCTTT
GCCGATCTTC CGCTGCCCGA CATCTACCGT CAGTTTGCAG ATGAGGATGC CGGCGGTGCC
GCATTCGCGC TGCGGCTCTC TGCCGAGCCC GGAGAGGCGC GCGCGGTCTC GATTACGCGT
AGCGCCGCCG GGGACGCATC TCCCGCGGCG CTCGAAAATC CGCCTGCGGA ACTTCTTGTA
AGACGGCTCG TGGACAGTCT TTGCTCCGAT GCGCCCGCGT TGTCATGGCG TTCGCAAGGA
TCGCTGTGGC GTTTGGGAAA ATCCTCCGAT GAAGCGGCTT GA
 
Protein sequence
MQSDRAMPGP AGLSAVFVES WAAMLADAPG EPPVRLGACA ADADIPAGLR RRLGPLARMG 
VACGLGIAPE GDADIVFCSR YGDLSLAHQL LAALVATEPM SPAGFSMSVH NAVPGVLDLA
RKARIGHTAI AAGAQTFSAG LAEAWLRLGE RPHLRLVLVF ADLPLPDIYR QFADEDAGGA
AFALRLSAEP GEARAVSITR SAAGDASPAA LENPPAELLV RRLVDSLCSD APALSWRSQG
SLWRLGKSSD EAA