Gene Plav_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1483 
Symbol 
ID5456877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1615750 
End bp1616061 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID640877056 
Productribosomal protein L21 
Protein accessionYP_001412760 
Protein GI154251936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAG TCATCCGGAC CGGCGGCAAG CAATACAGGG TCGCGAAAGA CGATGTGCTC 
GAGGTTGAGC GCAACGGCGG CGAAGCCGGC GACAAGATCG ACCTCGAAGT CCTGATGCTG
GGCGGCGAAG GCGGCACGCT CAAAGTCGGC GCGCCGCTCG TCGATGGCGC CAAGGTCAAA
GCCGAGATCG TCGAACACAC GCGCGGCCCG AAGATCACGA TCTTCAAGAA GCGCCGTCGC
CAGAACTATC GCCGCAAGAA CGGCCATCGC CAGGATCTGA TGCTCGTCAA GATCCTCGAC
ATCGCCGGCT AA
 
Protein sequence
MFAVIRTGGK QYRVAKDDVL EVERNGGEAG DKIDLEVLML GGEGGTLKVG APLVDGAKVK 
AEIVEHTRGP KITIFKKRRR QNYRRKNGHR QDLMLVKILD IAG