Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1472 |
Symbol | |
ID | 5454955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1605135 |
End bp | 1606469 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877045 |
Product | carboxyl-terminal protease |
Protein accession | YP_001412749 |
Protein GI | 154251925 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.732729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT CCGTCTTCGC TGGCTTTGCG GTCGGTACCT TCCTGTCCTT CGCTGCCGTT ATCGGCATGA AGCAGGGTTT CCTGGACACG CCGGCATACG CCGCCAGCGA CTCCAATACC TATCGCCAGC TCAATCTCTT CGGAGACGTG TTCGAGCGCG TGCGTGCGGA TTATGTCGAG CCGACGGATG ACGCCAAGCT CGTCGAAAAT GCCATCAACG GCATGCTGAC CTCACTCGAT CCGCATTCGA GCTACATGAC GCCCAAGACC TTCCGCGACA TGCAGGTCCA GACGCGCGGC GAATTCGGTG GCCTCGGCAT CGAGGTCACG ATGGAAAACG GCGTCGTTAA GGTGGTGACG CCAATCGACG ACACGCCGGC CAGCCGCGCG AACCTCCGCC CCAACGACTA CATCACGCAT ATCGACGGCA CGCAGATCCT CGGCATGACA CTGAGCGACG CGGTCGACAA GATGCGCGGG CCGGTCGATA CCGAGGTTAC GCTGACTGTC GTCCGGAAGG GCGAGGAAGA AGCCTTCGAC GTCAAGCTCA AGCGCGACAT CATCACCATC AAGTCGGTGA AGTACAATCG CGAGGGCGAC ATCGGCTATA TCCGCATCAC CTCATTCAAC GAGCAGACAT CCGACCTGCT CGAACAGGCG ATCTCCGATC TTTCCAAGCA GATCGGACCG TCGCGGCTGA AGGGCTTCAT CCTCGACATG CGCAACAATC CGGGCGGTCT GCTCGACCAG GCCATTTCGG TGAGCGACGA CTTCATCGAC GGCGGCGAAA TCGTATCGAC GCGCGGCCGC CACGCCGAAG ACACGCAGCG CTACAACGCG CGCAGCGGCG ACATCACCAA TGGCCGTCCG ATCATCGTTC TCGTGAATGG CGGTTCGGCG AGTGCATCGG AAATCGTTGC CGGTGCATTG CAGGACCATC GCCGCGCGAC TGTGCTCGGC ACCCGCTCCT TCGGCAAGGG TTCCGTGCAG ACGATCATCC CGCTCGGCTC CGACGGCGCG CTGCGCCTCA CCACCGCGCG TTACTACACG CCGGCCGGCC GCTCCATTCA GGCGAAGGGC ATCGATCCCG ATATCATCGT GACCCAGACG GACCCCGAAG CAAAAGAGAA GAAGAAGCAG ACCAGCATCG GCGAATCCAC GCTGCCCGGG CATCTGGCCG CCGAAGAAGG CGATGAGATG GCCGGCTCCG ACAGCTTCGT GCCGAAGGAC AAGAAAGACG ACAAGCAGCT TCTTTACGCG ATCGATCTCC TGAACGGTGC GCGCAAGGAT GCCGCGTATC TTGGCGGCAG GACATCGAGC GCGATGGCCA ACTGA
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Protein sequence | MNKSVFAGFA VGTFLSFAAV IGMKQGFLDT PAYAASDSNT YRQLNLFGDV FERVRADYVE PTDDAKLVEN AINGMLTSLD PHSSYMTPKT FRDMQVQTRG EFGGLGIEVT MENGVVKVVT PIDDTPASRA NLRPNDYITH IDGTQILGMT LSDAVDKMRG PVDTEVTLTV VRKGEEEAFD VKLKRDIITI KSVKYNREGD IGYIRITSFN EQTSDLLEQA ISDLSKQIGP SRLKGFILDM RNNPGGLLDQ AISVSDDFID GGEIVSTRGR HAEDTQRYNA RSGDITNGRP IIVLVNGGSA SASEIVAGAL QDHRRATVLG TRSFGKGSVQ TIIPLGSDGA LRLTTARYYT PAGRSIQAKG IDPDIIVTQT DPEAKEKKKQ TSIGESTLPG HLAAEEGDEM AGSDSFVPKD KKDDKQLLYA IDLLNGARKD AAYLGGRTSS AMAN
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