| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1472 |
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| Symbol | |
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| ID | 5454955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1605135 |
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| End bp | 1606469 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877045 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001412749 |
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| Protein GI | 154251925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.732729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGT CCGTCTTCGC TGGCTTTGCG GTCGGTACCT TCCTGTCCTT CGCTGCCGTT
ATCGGCATGA AGCAGGGTTT CCTGGACACG CCGGCATACG CCGCCAGCGA CTCCAATACC
TATCGCCAGC TCAATCTCTT CGGAGACGTG TTCGAGCGCG TGCGTGCGGA TTATGTCGAG
CCGACGGATG ACGCCAAGCT CGTCGAAAAT GCCATCAACG GCATGCTGAC CTCACTCGAT
CCGCATTCGA GCTACATGAC GCCCAAGACC TTCCGCGACA TGCAGGTCCA GACGCGCGGC
GAATTCGGTG GCCTCGGCAT CGAGGTCACG ATGGAAAACG GCGTCGTTAA GGTGGTGACG
CCAATCGACG ACACGCCGGC CAGCCGCGCG AACCTCCGCC CCAACGACTA CATCACGCAT
ATCGACGGCA CGCAGATCCT CGGCATGACA CTGAGCGACG CGGTCGACAA GATGCGCGGG
CCGGTCGATA CCGAGGTTAC GCTGACTGTC GTCCGGAAGG GCGAGGAAGA AGCCTTCGAC
GTCAAGCTCA AGCGCGACAT CATCACCATC AAGTCGGTGA AGTACAATCG CGAGGGCGAC
ATCGGCTATA TCCGCATCAC CTCATTCAAC GAGCAGACAT CCGACCTGCT CGAACAGGCG
ATCTCCGATC TTTCCAAGCA GATCGGACCG TCGCGGCTGA AGGGCTTCAT CCTCGACATG
CGCAACAATC CGGGCGGTCT GCTCGACCAG GCCATTTCGG TGAGCGACGA CTTCATCGAC
GGCGGCGAAA TCGTATCGAC GCGCGGCCGC CACGCCGAAG ACACGCAGCG CTACAACGCG
CGCAGCGGCG ACATCACCAA TGGCCGTCCG ATCATCGTTC TCGTGAATGG CGGTTCGGCG
AGTGCATCGG AAATCGTTGC CGGTGCATTG CAGGACCATC GCCGCGCGAC TGTGCTCGGC
ACCCGCTCCT TCGGCAAGGG TTCCGTGCAG ACGATCATCC CGCTCGGCTC CGACGGCGCG
CTGCGCCTCA CCACCGCGCG TTACTACACG CCGGCCGGCC GCTCCATTCA GGCGAAGGGC
ATCGATCCCG ATATCATCGT GACCCAGACG GACCCCGAAG CAAAAGAGAA GAAGAAGCAG
ACCAGCATCG GCGAATCCAC GCTGCCCGGG CATCTGGCCG CCGAAGAAGG CGATGAGATG
GCCGGCTCCG ACAGCTTCGT GCCGAAGGAC AAGAAAGACG ACAAGCAGCT TCTTTACGCG
ATCGATCTCC TGAACGGTGC GCGCAAGGAT GCCGCGTATC TTGGCGGCAG GACATCGAGC
GCGATGGCCA ACTGA
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| Protein sequence | MNKSVFAGFA VGTFLSFAAV IGMKQGFLDT PAYAASDSNT YRQLNLFGDV FERVRADYVE
PTDDAKLVEN AINGMLTSLD PHSSYMTPKT FRDMQVQTRG EFGGLGIEVT MENGVVKVVT
PIDDTPASRA NLRPNDYITH IDGTQILGMT LSDAVDKMRG PVDTEVTLTV VRKGEEEAFD
VKLKRDIITI KSVKYNREGD IGYIRITSFN EQTSDLLEQA ISDLSKQIGP SRLKGFILDM
RNNPGGLLDQ AISVSDDFID GGEIVSTRGR HAEDTQRYNA RSGDITNGRP IIVLVNGGSA
SASEIVAGAL QDHRRATVLG TRSFGKGSVQ TIIPLGSDGA LRLTTARYYT PAGRSIQAKG
IDPDIIVTQT DPEAKEKKKQ TSIGESTLPG HLAAEEGDEM AGSDSFVPKD KKDDKQLLYA
IDLLNGARKD AAYLGGRTSS AMAN
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