Gene Plav_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1466 
Symbol 
ID5455023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1599322 
End bp1599720 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID640877039 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_001412743 
Protein GI154251919 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA AGCTGAATTT CGACCTCGTG TCGCCGGAAC GGCTGCTCTT TTCAGGGCAG 
GTCGACATGG TGGTGATACC CGGTTCCGAG GGCGACATGG GCATCATGGC GGGCCACGCG
CCCGTCATGT CGACGCTCCG CCCCGGCATC ATCGAGGTCG AGAATGAGGG CGCGCCGCGT
CAGCGCATTT TCGTGCGCGG CGGTTTTGCC GAGGTGACGC CTGCCGGCCT CACGGTGCTT
GCCGAGTTCA CGGTACCGCT TGCCGATCTC GACGCGACGG CGCTCGACCG CGAAATCGCC
CTTGCCGACA AGGACGTGGC GGACGCGAAG AACGACGACA AGCGCCAGTC CGCGCTGGAA
AAGCTCGACC ACCTGAAAGA GCTTCGCCAC ACGGTCTGA
 
Protein sequence
MAEKLNFDLV SPERLLFSGQ VDMVVIPGSE GDMGIMAGHA PVMSTLRPGI IEVENEGAPR 
QRIFVRGGFA EVTPAGLTVL AEFTVPLADL DATALDREIA LADKDVADAK NDDKRQSALE
KLDHLKELRH TV