Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1465 |
Symbol | |
ID | 5454494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1597849 |
End bp | 1599285 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877038 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001412742 |
Protein GI | 154251918 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.58444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG CAGTCGGAAA GATCGCCCAA GTCATCGGCG CCGTCGTGGA CGTCACGTTC ACCGACAACC TGCCCGCCAT TCTGAACGCG CTCGAGACGA CCAATGGCGG CAATCGCCTC GTCCTCGAGG TCGCGCAGCA TCTTGGCGAG AACACGGTCC GCACCATCGC GATGGACACC ACCGAGGGTC TGACCCGCGG TCAGGAAGTC CGCGACACGG GCAATGCCAT CACGGTGCCG GTCGGCGAGG GTACGCTCGG CCGCATCATC AACGTCATCG GCGAGCCGGT GGACGAAGCA GGCCCCGTGA AGCATGAAGC GCGCCGCGAA ATCCATCAGG AAGCGCCGTC CTTCGTCGAA CAGTCGACGG AAGCGCAGAT GCTCGTCACC GGCATCAAGG TCGTCGACCT GCTCGCGCCT TATGCGCGCG GCGGCAAGAT CGGCCTCTTC GGCGGCGCCG GCGTCGGCAA GACCGTGCTC ATCCAGGAGC TCATCAACAA CATCGCGAAA GCGCATGGCG GCTATTCGGT GTTCGCCGGC GTCGGCGAGC GTACGCGCGA GGGCAACGAT CTCTATCACG AGATGATCGA GTCCGGCGTG AACAAGGATC CGAACGAAAA CAACGGCGAC ACGACCGGCT CGAAATGCGC CCTCGTGTTC GGCCAGATGA ACGAGCCGCC GGGAGCCCGC GCCCGTGTCG CGCTGACCGG CCTCACCGTC GCCGAGCATT TCCGCGACAA GGGCCAGGAC GTGCTGTTCT TCGTGGACAA CATCTTCCGC TTCACGCAGG CGGGCTCGGA AGTGTCGGCC CTTCTCGGCC GTATTCCTTC CGCCGTGGGC TATCAGCCGA CGCTCTCCAC CGACATGGGG GCGCTGCAGG AACGCATCAC CACCACCACC AAGGGCTCGA TCACGTCCGT GCAGGCCATT TACGTGCCCG CCGACGACTT GACAGACCCG GCGCCCGCCA CGTCCTTCGC TCACCTTGAC GCGACGACCG TGCTTAACCG CGCGATCTCG GAAAAGGGCA TCTATCCCGC CGTGGACCCG CTCGACTCGA CAAGCCGTAT TCTCGAGCCG CGCGTTGTCG GCCAGGAGCA TTACGACACC GCGCGCCAGG TGCAGGAAAT CCTGCAGCGC TACAAGTCGC TCCAGGACAT CATCGCCATT CTCGGTATGG ACGAGCTCTC CGAAGAAGAC AAGCTCGTCG TCGCCCGCGC CCGCAAGATC GAGCGTTTCC TGTCGCAGCC CTTCTTCGTC GCCGAAGTCT TCACCGGCAC GCCGGGCGTC CTCGTCGACA TCAAGGACAC GATCAAGGGC TTCAAGGGTC TGTGCAACGG CGACTACGAT CACCTGCCGG AAGCGGCCTT CTACATGGTC GGCACGATCG AGGATGCGGT CGCGAAGGCC GAGCGTCTCG CCAAGGAAGC GGCGTAA
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Protein sequence | MSNAVGKIAQ VIGAVVDVTF TDNLPAILNA LETTNGGNRL VLEVAQHLGE NTVRTIAMDT TEGLTRGQEV RDTGNAITVP VGEGTLGRII NVIGEPVDEA GPVKHEARRE IHQEAPSFVE QSTEAQMLVT GIKVVDLLAP YARGGKIGLF GGAGVGKTVL IQELINNIAK AHGGYSVFAG VGERTREGND LYHEMIESGV NKDPNENNGD TTGSKCALVF GQMNEPPGAR ARVALTGLTV AEHFRDKGQD VLFFVDNIFR FTQAGSEVSA LLGRIPSAVG YQPTLSTDMG ALQERITTTT KGSITSVQAI YVPADDLTDP APATSFAHLD ATTVLNRAIS EKGIYPAVDP LDSTSRILEP RVVGQEHYDT ARQVQEILQR YKSLQDIIAI LGMDELSEED KLVVARARKI ERFLSQPFFV AEVFTGTPGV LVDIKDTIKG FKGLCNGDYD HLPEAAFYMV GTIEDAVAKA ERLAKEAA
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