Gene Plav_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1461 
Symbol 
ID5454263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1593618 
End bp1594535 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID640877034 
Producthypothetical protein 
Protein accessionYP_001412738 
Protein GI154251914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCA AACATGTGCA CAGGGTGAAG GGCGCCGCCG GATGGTGCCG CCGGGTAGCG 
TGTCGCCCGG GAATTCCGCG TTCGCCTGAG GCAAAAAGGG GCTCCATCAT GGCCAATAGC
GAAACCGGCA ATCTCGCCCG GGCAAAGACG CCCGAAGTCC CGGTCCGGAT CGAGCAGGGG
CTCTACCGTC ACAATGTCAT CGACACACTC CAGGGCAGCG GCAATGTCGG CATCGAGCTC
GGCGTCGCCG GCGGCATCTT TTCGCGCCGC ATGGTCGAGA GCGGCAAGTT CAGGATGTTT
TATGGCGTCG ATCTCTACTC GGATCATCAC GACACCGCCG AATATGTCCG TGCTCTGAAA
CATGTCGGCA TCGAAGAGAA CTACAAGCTT CTTCGCATGT CCTTCGACGA TGCGCTGGCG
CTATTCGACG ATCATTATTT CGATTTCATC TATTTCGACG GCTATGCCCA TACCGGCGAG
GAGGGCGGCA AGTCCTTCGT CGACTGGTTC GCCAAGGTGA AGGTCGGCGG CGTGGTCGCC
GGCGACGACT ATCACGATGA CTGGCCGCTG GTGAAATGGG CGGTGAACAG TTTCGCCAGG
GCGCTCGATG TCGAACTCAA GGTGACGGGG CTGACGGAGA AGACAAATCT CTCGCGCTAT
CCTTCCTGGT TCTTCACCAA GGAGCGCGAC TTCGCCTTTG AAGGGCTCCT CGACGACGAG
CTCTTCTCGC TCGGGCAGAA GGCGAAGAAG GCCCGCGAGG CCGCAGCCGC CGCCGCGCCC
GCGGCCCGTT CCCAGGTGAC GCTCACGATC GACCAGATTC TCGAATTCTG CGAGAAACTC
TGCGCCCAGA TGCCCGACAA GGCGCAAGAG GTGCTGAAGA TCGCCCAGCG TCACACGGCG
GCCCGCAAGG CGGGCTGA
 
Protein sequence
MFFKHVHRVK GAAGWCRRVA CRPGIPRSPE AKRGSIMANS ETGNLARAKT PEVPVRIEQG 
LYRHNVIDTL QGSGNVGIEL GVAGGIFSRR MVESGKFRMF YGVDLYSDHH DTAEYVRALK
HVGIEENYKL LRMSFDDALA LFDDHYFDFI YFDGYAHTGE EGGKSFVDWF AKVKVGGVVA
GDDYHDDWPL VKWAVNSFAR ALDVELKVTG LTEKTNLSRY PSWFFTKERD FAFEGLLDDE
LFSLGQKAKK AREAAAAAAP AARSQVTLTI DQILEFCEKL CAQMPDKAQE VLKIAQRHTA
ARKAG