| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1454 |
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| Symbol | sucA |
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| ID | 5456938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1582787 |
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| End bp | 1586038 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877027 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001412731 |
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| Protein GI | 154251907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCAA GGCAAAATGC GTTGACAGGC CCATTGCCTC TGTGGCAATT TTCCTCCATG
AAACTTTCCG ACTGGCTCGA AACAAACAAT CTGACGGCGA GTGCCTTCGC CGAGCAGCTT
GGTGTTTCCG TGTCCACGGT CACTCGCTGC ATGAACGGTC AGCGCCGGCC TGAATGGCCC
ACGCTGGACT CGATCTTCAA GGCGACGGGC GGCGCGGTGA CGCCCAATGA TTTTCTGTCC
GATGCCGCGG CTCTTCAGGG AACGGCGCCT GCCTCCCCAA AGCCAAATGG ATCCGATCCG
ATGAGCAGTA ATGGTTCGAA CGACCGCTTC GAGCGGACGT CGTTTCTCTA TGGCGGCAAC
GCGCTCTTTG TCGAGCAGCT CTATGCCCGC TACCAGAAAG ACCCCCAATC GGTCGATGCG
GAGTGGCGCA CCTTTTTCGA AAGCCTCGGC GATGCGCCCG AAGACGTGCT GAAGGAAGCC
AGGGGCGCCT CCTGGCAGCG CGCCGACTGG CCGATCGCCG CCAATGGCGA ACTGGTGAGC
GCGCTTGACG GCAACTGGGG TGCGACGACG GCCGTTGAGG CCGGCAAGGT CAAGGACAAG
ATCGCGGAGC GCCGTCCGGC GGCCAGCGAA GAGGAAATTC GCGCGGCAAC GCTCGATTCC
GTCCGTGCGC TGATGATGAT CCGCGCCTAT CGTATTCGCG GCCATCTCGA TGCCGATATC
GATCCGCTGA AGCTTCGTCC GAAGTCGCAG CATCCCGAAT TGCAGCCTGA AAGCTATGGC
TTCGGGCCGG ACGATCTCGA CCGGCCGATC TTCATCGACC ATGTGCTCGG CCTCGAAACG
GCGACCGTGC GCGAGATGCT CGACATCCTG CGCCGCACCT ATTGCGGAAC GCTCGCCGTC
GAATTCATGC ATATCGGCGA TCCCGAAGAA AAGGCGTGGA TACAGGAACG CATCGAAGGG
CCGGACAAGG AAATCGCCTT CACGGACATG GGCCGTTCGG CGATCCTCGA CAAGCTTATC
CAGGCGGAAG GCTTCGAAAA GTTCTGCGGC GTCAAATATG TCGGCACCAA GCGTTTCGGT
CTCGATGGCG CGGAAGCGAT GATCCCGGCG CTCGAACAGA TCATCAAGCG CGGCGGCGCG
CTCGGCGCCA AGGAAATCGT TTTCGGCATG GCCCATCGCG GCCGGCTCAA TGTGCTGACC
AACGTGATGT CGAAGCCCTA TCACGCGGTT TTTCACGAGT TCAAGGGCGG TTCCTCGACG
CCGGAAGACG TCGATGGTTC AGGCGACGTG AAGTATCACC TCGGCGCCTC GTCGGACCGT
GAGTTCGACG GCAACAAGGT GCATCTCTCG CTCACCGCCA ATCCGTCGCA TCTCGAAATC
GTCGATCCCG TCGTGCTCGG CAAGGCGCGC GCGAAGCAGG ACCAGCATCA CGACCGCCAG
CGCGGTTCGG TGATCCCGCT CCTCATTCAC GGCGATGCCG CCTTCGCGGG CCAGGGCATC
GTCGCCGAGT GTCTCGGCCT GTCCGACCTC AAGGGGCATC GGACAGGCGG CTCGATCCAT
TTCATCATCA ACAACCAGAT CGGCTTCACG ACGAGCCCGA TCAACAGCCG CTCGTCGCCC
TATCCCTCGG ATGTGGCGAA GATGGTGCAG GCGCCGATCT TCCATGTGAA TGGCGACGAC
CCGGAAGCGG TTGTCCATGC CGCCAAGATC GCGACCGAGT TCCGCCAGCG CTTCAACAAG
CCTGTCGTGA TCGACATGTT CTGTTATCGC CGCTTCGGTC ATAACGAAGG CGACGATCCG
AGCATGACGC AGCCGCTCAT GTACGAAAAG ATCAAGGATC ATCCGACGAC GCTGCAGATT
TATTCGCAGC GGCTGATCGA GGAAAACCTG ATGACGGCGG CGGAAGTCGA TGAGCGGCTT
GCTGCTTTCC GCGCCGAGCT CGAAAGTCAT TACGAGGCCG CGGGCACTTT CCGTCCCAAC
AAGGCGGACT GGCTCGATGG CCGCTGGTCC GGCTTCAGCA AGGCGGAAGG CGAAGCGCGC
CGGGGCGAAA CGGCCGTCGA GGTCGACAGG CTGCGTGAGA TCGGCCGCAA GATCACCGAG
GTGCCGGAAG GCTTCCACAT CCACAAGACC ATCCAGCGCT TTCTGGACAA TCGGCGGAAA
TCGATTGAAA CCGGCGAAGG CATCGACTGG TCGACGGCGG AGGCGCTCGC CTTCGGTTCG
CTGGTCTCCG AGGGCATCAA GGTCCGTCTC TCGGGTCAGG ATTCCGAGCG CGGCACCTTC
GTGCAGCGCC ATTCGGTGCT GAACGATCAG CAGACCGAAG ACCGTTACGT GCCGCTCAAC
AATATCTCCG AGGGCCAGGC CGAATACGAA GTCATCAACT CGATGCTGTC GGAAGCCGCC
GTTCTCGGTT TCGAGTATGG TTACAGCCTC GCCGAGCCGA ATGCGCTTGT GCTCTGGGAA
GCGCAGTTCG GCGACTTCGC AAACGGCGCG CAGGTCGTGA TCGACCAGTT CATTTCGTCG
GGCGAGCGGA AATGGCTTCG CATGTCGGGC CTCGTCATGC TGCTGCCGCA TGGTTATGAG
GGGCAGGGGC CGGAACATTC CTCCGCCCGC CTCGAGCGCT TCCTGCAGAT GTGCGCGGAA
GACAACATGC AGGTCGCGAA CTGCACCACG CCGATGAACT ATTTCCACAT TCTGCGCCGG
CAGATGCACC GCAAGTTCCG CAAGCCGCTC ATCCTGATGA CGCCGAAGTC CCTTCTGCGT
CACAAGCGGG CGGTGTCGAG GATCGAGGAG TTCGGTGCCG GTTCGTCCTT CCACCGTGTG
TTGTGGGACG ATGCGGAGCT GCTGCCCGAC CAGAAGATCA AGCTTTTGCC CGACAAGGAC
ATCAAGCGCG TCGTGCTCTG CTCGGGCAAG GTCTATTACG ATCTCTATGA AGAGCGCGAG
CGCCGCGGCA TCAACGACAT CTACATCCTG CGCGTGGAGC AGCTTTACCC CGTTCCCGCG
AAGTCGCTGA TGACGGAGCT GGCGCGTTTT CCCGAAGCGG AATTCGTCTG GTGCCAGGAA
GAGCCGAAGA ACATGGGCGC CTGGAACTTC ATCGAACCCA ATATCGAATG GGTGCTCAAT
CATGTCGGCA CGCGCTATCG CCGCGCAACC TATGCCGGCC GTCCGGCATC GGCGGCCACG
GCGTCGGGCC TCATGAGCAG GCACAATCAG GAACTCAACC AGCTTCTTTC GGAAGCGCTG
AAGATCGATT GA
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| Protein sequence | MPSRQNALTG PLPLWQFSSM KLSDWLETNN LTASAFAEQL GVSVSTVTRC MNGQRRPEWP
TLDSIFKATG GAVTPNDFLS DAAALQGTAP ASPKPNGSDP MSSNGSNDRF ERTSFLYGGN
ALFVEQLYAR YQKDPQSVDA EWRTFFESLG DAPEDVLKEA RGASWQRADW PIAANGELVS
ALDGNWGATT AVEAGKVKDK IAERRPAASE EEIRAATLDS VRALMMIRAY RIRGHLDADI
DPLKLRPKSQ HPELQPESYG FGPDDLDRPI FIDHVLGLET ATVREMLDIL RRTYCGTLAV
EFMHIGDPEE KAWIQERIEG PDKEIAFTDM GRSAILDKLI QAEGFEKFCG VKYVGTKRFG
LDGAEAMIPA LEQIIKRGGA LGAKEIVFGM AHRGRLNVLT NVMSKPYHAV FHEFKGGSST
PEDVDGSGDV KYHLGASSDR EFDGNKVHLS LTANPSHLEI VDPVVLGKAR AKQDQHHDRQ
RGSVIPLLIH GDAAFAGQGI VAECLGLSDL KGHRTGGSIH FIINNQIGFT TSPINSRSSP
YPSDVAKMVQ APIFHVNGDD PEAVVHAAKI ATEFRQRFNK PVVIDMFCYR RFGHNEGDDP
SMTQPLMYEK IKDHPTTLQI YSQRLIEENL MTAAEVDERL AAFRAELESH YEAAGTFRPN
KADWLDGRWS GFSKAEGEAR RGETAVEVDR LREIGRKITE VPEGFHIHKT IQRFLDNRRK
SIETGEGIDW STAEALAFGS LVSEGIKVRL SGQDSERGTF VQRHSVLNDQ QTEDRYVPLN
NISEGQAEYE VINSMLSEAA VLGFEYGYSL AEPNALVLWE AQFGDFANGA QVVIDQFISS
GERKWLRMSG LVMLLPHGYE GQGPEHSSAR LERFLQMCAE DNMQVANCTT PMNYFHILRR
QMHRKFRKPL ILMTPKSLLR HKRAVSRIEE FGAGSSFHRV LWDDAELLPD QKIKLLPDKD
IKRVVLCSGK VYYDLYEERE RRGINDIYIL RVEQLYPVPA KSLMTELARF PEAEFVWCQE
EPKNMGAWNF IEPNIEWVLN HVGTRYRRAT YAGRPASAAT ASGLMSRHNQ ELNQLLSEAL
KID
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