| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1452 |
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| Symbol | |
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| ID | 5455669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1580553 |
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| End bp | 1581722 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877025 |
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| Product | succinyl-CoA synthetase, beta subunit |
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| Protein accession | YP_001412729 |
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| Protein GI | 154251905 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.567076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC ACGAATACCA GGCCAAGGCC GTGCTCGCGA AGTATGGCGT GCCGGTGCCC
AGCGGCCATG CGGCCTTCAC GCCTGAGGAA GCGGTCGCGA AAGCGAAAGA ACTCGGCGGG
CCGGTCTGGG TCGTCAAGGC GCAGATCCAT GCAGGCGGCC GCGGCAAGGC CGGCGGCGTC
AAGGTCGTGA AGTCGCTCGA CGATGTGAAG AAGGAAGCGA CACGGCTGAT CGGCTCGACG
CTCGTCACGC ATCAGACGGG CCCCGACGGC AAGGAAGTGA ACCGCCTCTA TATCGAGGAC
GGCTCCTCCA TCTCCCGCGA GCTTTACCTC TCCATTCTCG TCGATCGCGC CACCTCGCGC
GTCTCGTTCA TCGTCTCGAC CGAAGGCGGC ATGGATATCG AGGAAGTGGC GAAGAAGACG
CCGGAAAAAA TTCTCAGCTT CTCGGTTGAT CCCGCCTCCG GCATCAGCGG CTTTCACGGC
CGCAAGGTCG CCTATGCGCT CGGCCTTGAA GGCGACCAGG TGAAGCAGGG CGTCGCCCTC
ATCGAAAAGC TCTACAAGGC CTTCGTCACC GAAGACATGA GCATGCTCGA GATCAATCCG
CTCGTCGTCA CTGGCGAGGG CAATCTGCTC TGCCTCGACG CCAAGGTAAA CTTCGATTCG
AACGCGCTCT ACCGTCACAA GGACATTGTC GAGCTGCGCG ACCTCACGGA AGAAGATCCT
GCCGAGGTCG AAGCGTCGAA ATACGACCTC AACTACATCA AGCTCGACGG CAAGATCGGC
TGCATGGTCA ACGGCGCCGG TCTCGCCATG GCGACCATGG ACATCATCAA GCTTTATGGC
TCCGAGCCCG CGAACTTCCT CGATGTCGGC GGCGGCGCGA CGAAGGAGAA GGTCACGGCG
GCCTTCAAGA TCATTCTGTC GGATCCGAGC GTCGAAGGCA TTCTCGTCAA CATCTTCGGC
GGCATCATGC GTTGCGACAT CATTGCCGAG GGCGTCATCG CCGCGGCGAA GGAAGTCTCG
CTCAGCGTGC CGCTCGTCGT GCGCCTCGAA GGCACGAATG TCGATCTCGG CAAGAAGATC
ATGGCCGAGA GCGGCCTGCC CATCATTTCA GCGGACAACC TCGCCGATGC GGCCGAGAAA
ATCGTCAAAG CCGTGAAGGA GGCCGCATAA
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| Protein sequence | MNIHEYQAKA VLAKYGVPVP SGHAAFTPEE AVAKAKELGG PVWVVKAQIH AGGRGKAGGV
KVVKSLDDVK KEATRLIGST LVTHQTGPDG KEVNRLYIED GSSISRELYL SILVDRATSR
VSFIVSTEGG MDIEEVAKKT PEKILSFSVD PASGISGFHG RKVAYALGLE GDQVKQGVAL
IEKLYKAFVT EDMSMLEINP LVVTGEGNLL CLDAKVNFDS NALYRHKDIV ELRDLTEEDP
AEVEASKYDL NYIKLDGKIG CMVNGAGLAM ATMDIIKLYG SEPANFLDVG GGATKEKVTA
AFKIILSDPS VEGILVNIFG GIMRCDIIAE GVIAAAKEVS LSVPLVVRLE GTNVDLGKKI
MAESGLPIIS ADNLADAAEK IVKAVKEAA
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