Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1426 |
Symbol | |
ID | 5456199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1557088 |
End bp | 1558167 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876999 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001412703 |
Protein GI | 154251879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA TAAAGCGGGT CATGACGCAT AAGGCAAAGA GCCGAGGAGA AACACTCATG GGCTACAAGA TTGCCGTTCT CGGCGCCACG GGCAATGTGG GGCAGGAGAT GCTGAGCATT CTCGCCGAGC GCGCGTTTCC GGCGGATGAG GTCGTGGCGC TGGCGTCGCG CCGCAGCCAG GGCACGGAAG TCTCCTATGG CGACCGCACG CTCAAGGTGA AGACGCTCGA CACCTATGAT TTCAAAGGCA CCGATATCTG CCTGATGGCG ACGACGGGCG CCATGTCCGC CGAATGGGCG CCGAAGATCG CGGCAAAGGG CTGCGTCGTC ATCGACAATT CGTCGCGCTG GCGCATGGAT GCGGATGTGC CGCTGATCGT GCCGGAAGTG AACGCGGCCG CCATCGCCGG TTACACGAAG AAGAACATCA TCGCCAATCC GAATTGCTCG ACGGCGCAGA TGGTCGTGGC GCTGAAGCCG CTGCATGATG CCGCCGGCAT CCGCCGCGTC GTCGTCTCGA CCTATCAGTC GGTGTCCGGC GCGGGCAAGG AGGCGATGGA CGAGCTCTTC ACGCAGACGC GCGCGATCTT CGTCAATGAC GCGCTGGTCA ACGAGAACTT CACCAAGCAG ATCGCCTTCA ACGTCATCCC CCATATCGAC GATTTCATGG AGGATGGGCA GACGAAGGAA GAATGGAAAA TGACGGTCGA GACGAAGAAG ATTCTCGACC CGAAGATCAA GGTGACGGCC ACCTGCGTCC GCGTGCCCGT CTTTGTCGGT CATTCGGAAG CGATCAATAT CGAGTTCGAG CGGCCGATCT CGGATGAGGA GGCGCGCGAG ATATTGCGCG AGGCGCCGGG CTGCCTCGTC GTCGACAAGC ATGAGGATGG CGGCTATGTC ACGCCCATCG AATGCGTCGG CGATTATGCG ACCTATATCA GCCGCATCCG CGTCGATCCG ACCGTCGAAA ACGGCCTCAA TATCTGGGTC GTGTCGGACA ATCTGCGCAA GGGCGCGGCG CTCAATGCGG TCCAGATTGC CGAAATTCTG GGCGCGCGCT ACCTGAAAAA GGCGGCCTGA
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Protein sequence | MTRIKRVMTH KAKSRGETLM GYKIAVLGAT GNVGQEMLSI LAERAFPADE VVALASRRSQ GTEVSYGDRT LKVKTLDTYD FKGTDICLMA TTGAMSAEWA PKIAAKGCVV IDNSSRWRMD ADVPLIVPEV NAAAIAGYTK KNIIANPNCS TAQMVVALKP LHDAAGIRRV VVSTYQSVSG AGKEAMDELF TQTRAIFVND ALVNENFTKQ IAFNVIPHID DFMEDGQTKE EWKMTVETKK ILDPKIKVTA TCVRVPVFVG HSEAINIEFE RPISDEEARE ILREAPGCLV VDKHEDGGYV TPIECVGDYA TYISRIRVDP TVENGLNIWV VSDNLRKGAA LNAVQIAEIL GARYLKKAA
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