| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1417 |
|---|
| Symbol | |
|---|
| ID | 5455816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1549176 |
|---|
| End bp | 1549655 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640876990 |
|---|
| Product | CinA domain-containing protein |
|---|
| Protein accession | YP_001412694 |
|---|
| Protein GI | 154251870 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TGATCCCGCT CGCGGCGGAA GTCGCGGAAC TGCTCAAAAA GCGCGGCGAA
ACGCTGGCAC TGTCGGAATC GTCCATGGGC GGGCTCGTCT CGGCGGCGCT GGTCGCGCAG
CCGGGCGCCT CGGCCTTCTA TCTGGGGTCC ACCATCATCT ATACGCGCGG TGCGGCCAAG
GCGCTTTACG ACCTGAAGGG CCCGCCCGCG CCGGATGTGA AGCCCTTGAC CGAGCCTTAT
GTGGCGGCGA TGGCCGATGT CGTGCGCGGC AAGCTCGGCT CCACCTGGGC ACTGGCGGAA
ATGGGCGCTT CCGGCCCTTC AGGTTCGCCC TATGGCCCCG GGCCCGGCAC GGCGGTCATA
GGCCTTGCAG GGCCGCACCC CGCCTCGATC ACGGTCAGTA CCGGCTCCGC CGACCGCGCC
GCCAATATGC GCGCCTTCGG CGAGGCGGCG CTCAAATTGT TGCTGAAATC ATTGACTTGA
|
|---|
| Protein sequence | MEKLIPLAAE VAELLKKRGE TLALSESSMG GLVSAALVAQ PGASAFYLGS TIIYTRGAAK
ALYDLKGPPA PDVKPLTEPY VAAMADVVRG KLGSTWALAE MGASGPSGSP YGPGPGTAVI
GLAGPHPASI TVSTGSADRA ANMRAFGEAA LKLLLKSLT
|
|---|
| |