| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1414 |
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| Symbol | |
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| ID | 5455326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1546143 |
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| End bp | 1547405 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876987 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001412691 |
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| Protein GI | 154251867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG GAACGGAAAT TGTCACCTTC GGCTGCCGCC TCAATGCCTA TGAATCCGAA
GTCATGCGCG GCCACGCCGA AGCGGCCGGG CTCGACGGCG CCATCGTGTT CAATACCTGC
GCGGTGACGG CGGAAGCCGA GCGCCAGGCG CGACAGGCGA TCCGCAAGGC ACGCCGCGAA
AACCCGCAAG CCCGCATCAT CGTCACCGGC TGCGCGGCAC AGGTGAACCC GGATGCCTTT
GCCGAAATGA CCGAAGTCGA TCTCGTGATC GGCAATGAGG AAAAGCTGCA GGCAGCAAGC
TGGCAGCCCG CACTGGCGCT CCACACCAAT GAGCGCGTGC GCGTAAACGA CATCATGTCG
GTGACGGAAA CGGCGGGGCA TCTCGTCGGC GGCCTCGAAG GACGCGCGCG CGCCTTCGTG
CAGGTACAGA ACGGCTGCGA CCACCGCTGC ACCTTCTGCA TCATTCCTTA TGGGCGGGGG
CCTTCGCGCA GCGTGCCGGC CGGCGAAGTC GTCAATCAGG TGAGGACGCT TGTCGGTAAC
GGCTACCGCG AAGTCGTGCT GACCGGCGTC GACATGACGT CTTACGGCGG CGACCTGCCC
GGACGCCCGA GCCTCGGCAA TCTCGCACGG CGCATATTGA AGCTGGTGCC GGAACTCGAA
CGGCTGCGGC TTTCTTCGAT CGACTCGATC GAAGCGGATG ACGAGCTGAT GCGGCTGATC
GCGGAGGAGG AACGGCTGAT GCCGCATCTC CATCTCTCGC TGCAATCGGG CGACGACATG
ATCCTGAAGC GCATGAAGCG CCGCCACCTG CGCGAGGACT CGATCCGCTT CTGCGAGGAT
GTGCGCAAGG CTCGCCCCGA CATCATCTTC GGCGCGGATT TCATCGCCGG GTTCCCGACC
GAGACGGACG AGATGTTCGA AAACACGATG CGGCTCGTCG ACGAATGCGG GCTGACATGG
TTGCATGTCT TTCCCTTCTC GCCCCGCCCG GGGACACCCG CCGCGAAGAT GCCACAGGTT
TCGCGCGAAA TGGGCAAGGC CCGCGCCGAA CGCCTGCGCA TGAAGGGCGC GGAGCGCGTG
CGCGCGCATC TCGAAAGCGG CCTCGGCGCG ACAAGGCCCG TGCTGATGGA AACGCCGACG
CTCGGCCGCA CGCATCAGTT CACGCCGGTG CGCGTGACAG AAGCGGCGAC GGCAGGCGAA
ATCCTGCCTC TTCGCCTTGC CGCGCATGAC GGCCAGAGCT TTGAAGGGTT GAGAGCGGCG
TGA
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| Protein sequence | MKKGTEIVTF GCRLNAYESE VMRGHAEAAG LDGAIVFNTC AVTAEAERQA RQAIRKARRE
NPQARIIVTG CAAQVNPDAF AEMTEVDLVI GNEEKLQAAS WQPALALHTN ERVRVNDIMS
VTETAGHLVG GLEGRARAFV QVQNGCDHRC TFCIIPYGRG PSRSVPAGEV VNQVRTLVGN
GYREVVLTGV DMTSYGGDLP GRPSLGNLAR RILKLVPELE RLRLSSIDSI EADDELMRLI
AEEERLMPHL HLSLQSGDDM ILKRMKRRHL REDSIRFCED VRKARPDIIF GADFIAGFPT
ETDEMFENTM RLVDECGLTW LHVFPFSPRP GTPAAKMPQV SREMGKARAE RLRMKGAERV
RAHLESGLGA TRPVLMETPT LGRTHQFTPV RVTEAATAGE ILPLRLAAHD GQSFEGLRAA
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