| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1411 |
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| Symbol | |
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| ID | 5453715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1542843 |
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| End bp | 1544492 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876984 |
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| Product | general substrate transporter |
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| Protein accession | YP_001412688 |
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| Protein GI | 154251864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.966407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG ACAGGACGGC GCGCATGACG CCGGAAGAGC GGCGGGTGAT TTTCGCCTCT
TCGCTCGGCA CGGTGTTCGA GTGGTACGAC TTTTATTTGT ACGGCTCGCT CGCGGCGATC
ATCTCCGTGC AGTTTTTCTC CGGCGTCAAT CCGACGGCGG GTTTCATCTT CGCGCTGCTT
GCTTTTGCCG CCGGCTTTGC GGTCCGTCCC TTCGGCGCCA TCGTCTTTGG GCGTCTCGGC
GATCTTGTGG GTCGCAAATA CACGTTCCTG GTCACCATCC TCATCATGGG CGTGGCGACC
TTCATCGTCG GTCTGCTGCC AAATTACGAG ACCATCGGCT TTGCCGCGCC GGCTATCCTG
ATCGCCTTGC GGCTTGCGCA GGGCCTCGCA CTTGGCGGCG AATATGGCGG CGCGGCCATC
TATGTCGCGG AACATGCGCC TCATGCGAAG CGCGGCGCCT ATACGTCATG GATACAGACC
ACAGCGACGC TTGGTCTCTT CCTTTCGCTT CTCGTCATTC TCGGTTGCCG TCTTTCGATG
GACAAGGAGA GCTTCGAGAG CTGGGGCTGG CGTATTCCGT TCCTTCTTTC CATCGTCCTG
CTTGGCATTT CCGTCTGGAT AAGGCTCCGT CTCAACGAGT CGCCGCTGTT CCAGCGGATG
AAGGCGGAAG GGACGCTGTC CAAGGCGCCG CTCACGGAAT CCTTCGCGCG CTGGGGTAAT
CTCAAGATCG TCATCATCGC CCTGGTCGGC CTTACAGCCG GACAAGCCGT CGTCTGGTAT
ACGGGGCAGT TCTATGCGCT CTTCTTCCTG ACGCAGGTGC TGAAGGTCGA CAGCCAGACA
GCGAACATCC TTATCGGCGG TGCGCTGCTT GTCGGCGTTC CCTTCTTCGT AATTTTCGGT
GCCTTGTCTG ACAGGATCGG GCGCAAGCCG ATCATTCTGG CGGGCTGCCT GCTTGCGGCG
TTGACCTATT TCCCTCTCTT CTCCGCGCTC ACGCACTACG CCAACCCCGC ACTGGAAGCC
GCGCAGGAGA GGGCACCCGT CGTCGTCGTG GCCGACAGCG CCGCCTGTTC CTTCCAGTTC
AATCCGGTCG GTACCTCGGC CTTCACCACG CCCTGCGATG TCGCAAAGAG CGAACTCGCA
AAACGTGGCA TCCCCTATTC GAATGCGGAG CTCAGAGCAG GGGAGGAAAC GCGCATCGAG
GTAGGCTCTA TCGCCGTTCC ATCATTTGAC GCCAGCGATG ACGCCGGTGG TGAGGCGCGC
GCCGCTTTCG CTGCGGCGCT GACGCTTGCC TTGACGGAAG CCGGCTATCC GCTCGCGGCC
GATCTCGCCG CCATCAACTA TCCGATGGTG GTGCTGATCC TCTTCATCCT CGTTCTCTAT
GTGACGATGG TCTATGGGCC GATCGCGGCG ATGCTGGTCG AGCTTTTCCC GACGCGCATC
CGCTATACGT CGATGTCGCT TCCGTATCAC ATCGGCAATG GCTGGTTCGG CGGCTTCCTG
CCGACGGTCT CTTTCGCCAT CGTGGCGGCG ACGGGAAACC TCTATTCAGG TCTTTGGTAT
CCGGTCGCCA TCGCCGCCAT GACCTTTGTC GTGGGGCTCA TCTTCGTGCC CGAAACGAAA
GACAGGGCGC TGCATCCGGA AGAAGGCTGA
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| Protein sequence | MAEDRTARMT PEERRVIFAS SLGTVFEWYD FYLYGSLAAI ISVQFFSGVN PTAGFIFALL
AFAAGFAVRP FGAIVFGRLG DLVGRKYTFL VTILIMGVAT FIVGLLPNYE TIGFAAPAIL
IALRLAQGLA LGGEYGGAAI YVAEHAPHAK RGAYTSWIQT TATLGLFLSL LVILGCRLSM
DKESFESWGW RIPFLLSIVL LGISVWIRLR LNESPLFQRM KAEGTLSKAP LTESFARWGN
LKIVIIALVG LTAGQAVVWY TGQFYALFFL TQVLKVDSQT ANILIGGALL VGVPFFVIFG
ALSDRIGRKP IILAGCLLAA LTYFPLFSAL THYANPALEA AQERAPVVVV ADSAACSFQF
NPVGTSAFTT PCDVAKSELA KRGIPYSNAE LRAGEETRIE VGSIAVPSFD ASDDAGGEAR
AAFAAALTLA LTEAGYPLAA DLAAINYPMV VLILFILVLY VTMVYGPIAA MLVELFPTRI
RYTSMSLPYH IGNGWFGGFL PTVSFAIVAA TGNLYSGLWY PVAIAAMTFV VGLIFVPETK
DRALHPEEG
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