| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1408 |
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| Symbol | |
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| ID | 5456458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1540657 |
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| End bp | 1541214 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876981 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001412685 |
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| Protein GI | 154251861 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGC GTTTCCGTCT CGCCGCTCTC GTCCCCGTCG TTATTTTTCT GGTTCTGGCG
GCGTTGTTCT TCACCGCCAT TTATCGCGGC GATCCGTCGC GCGTACCATC CGCGCTGATC
GGCCGCTATG TGCCGGATTT TGATCTTCGT CCCGTCGAAG GTCTCGATCT GCCCGGCGTG
GCAGCAGCCG ATTTCGGCAA GGGCGTTCCC GTCATCGTCA ATGTCTGGGC ATCCTGGTGC
GTGCCCTGCA GGGATGAGAT GCCGCTTCTT GTTGAACTTC GCCGCATTGC GGGCGTGCCC
ATGTTCGGGC TCAACTACAA GGACGATCCC GCTGCCGCGC GGCGCTTTCT CACCGAACTC
GGCAATCCGT TCGACCGCAT CGGACGCGAC GATACCGGCC GCGCCGCCAT TGAATGGGGC
GTTTATGGCG TACCGGAAAC CTATGTCGTG GATGGCAATG GCCGTATCGC CTTCAAGCAT
ATCGGTCCGC TGACGCCTGA AGCCGTGGCG GACCAGATAT TGCCGGCGCT GCAGACGGCG
CGTCATCCCG AAAGATAA
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| Protein sequence | MNPRFRLAAL VPVVIFLVLA ALFFTAIYRG DPSRVPSALI GRYVPDFDLR PVEGLDLPGV
AAADFGKGVP VIVNVWASWC VPCRDEMPLL VELRRIAGVP MFGLNYKDDP AAARRFLTEL
GNPFDRIGRD DTGRAAIEWG VYGVPETYVV DGNGRIAFKH IGPLTPEAVA DQILPALQTA
RHPER
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