| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1406 |
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| Symbol | |
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| ID | 5455973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1539688 |
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| End bp | 1540455 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876979 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001412683 |
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| Protein GI | 154251859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCA TGAGCAGCCT TTCGGCCACA CAGCGGTTCC ATGCCTATGC CAATCCGACG
CGCTTCATGG CGCTGTCGGG CAAGCTGCTT GCGCCGCTTT GGGTACTGAC CGCGCTTTTG
ATCGCGGCAG GCCTCTGGTT CGCCCTTTTT GCGTCGCCGC CCGATTACCA GCAGAGCGAG
ACTGTGAGGA TCATGTATGT GCATGTGCCT TCAGCCTGGC TCGCGATGTT CGGCTATTCG
ATCATGGCCG CCGCATCCGC CGTGGCGCTG ATCTTCAGGC ACCCGCTCGC CGATCTCTGC
GCCAAATCGG CGGCTCCGAT CGGCGCCTCC TTCACCTTTC TCGCGCTTGT CACCGGCTCG
CTCTGGGGAC AGCCGATGTG GGGAACGTGG TGGGAGTGGG ATGCGCGGCT TACATCCGTT
CTGATCCTCT TCTTTCTCTA TCTCGGCTAT ATCGCGCTCT GGGCGACGAT AGAAGAACCT
GTCCGCGCCG CACGCGCCGC CGCCGTTCTG GCGCTTGTCG GAGCGATCAA TATTCCGATC
ATCCGTTACT CGGTCGTCTG GTGGAATACG CTTCATCAGC CCGCTTCGGT TTTCCGGATG
GAAGGGCCCA CCATTGCGCC TGCCATGCTG CTGCCGCTGA TGCTTATGGC GCTGGGCTTC
ACTTCTCTCT TCGTGACGTT GCTGCTGGTG CGGATGCGGG CGGAAATTCT TCGCCGGCGC
GTCCGTGCGC TGCGCCTCGC CCAGGCCGCT TCCGGAGCGG AGGGCTGA
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| Protein sequence | MARMSSLSAT QRFHAYANPT RFMALSGKLL APLWVLTALL IAAGLWFALF ASPPDYQQSE
TVRIMYVHVP SAWLAMFGYS IMAAASAVAL IFRHPLADLC AKSAAPIGAS FTFLALVTGS
LWGQPMWGTW WEWDARLTSV LILFFLYLGY IALWATIEEP VRAARAAAVL ALVGAINIPI
IRYSVVWWNT LHQPASVFRM EGPTIAPAML LPLMLMALGF TSLFVTLLLV RMRAEILRRR
VRALRLAQAA SGAEG
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