| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1404 |
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| Symbol | |
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| ID | 5456130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1538289 |
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| End bp | 1538930 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876977 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_001412681 |
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| Protein GI | 154251857 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACGACAT CTGATTTTCC TGCGCCCGCG CGTCTCGCCG CCCGCGACCT CGCCTGCCTC
CGCGGCGGAC GGCTCGTCTT CGAGGGGCTG ACATTCAGCG TCGCGCGCGG CGAAGCCCTG
GTGCTGACGG GCGCCAACGG CGCGGGCAAG TCGAGCCTGT TGCGTCAGAT CGCGGGCCTG
CTTGAAATCG ATCACAGCGC GATCGCGCTG GAAGGTGGGG ATAGCGAACT CACGATCGGC
GAACAGGCGC ATTATGTCGG CCACCTCGAT GCGCTGAAGC CGTCCATGAG CGTCCTGGAG
ACACTGCATT TCTGGAAGCA ATATTTCGGC GGTGCGGATG ATGCCGCCGT CTCGGCGGCG
CTCGAGGCAT TCGCTCTCAC CCCGCTCGCG GATCTGCCTG TTGGCTATCT CTCGGCCGGC
CAGCGGCGGC GCGTCTCGCT TGCCCGTATG CTGGTGGCGC CGCGTCCGCT CTGGCTTCTC
GACGAACCGA CCGTCGCGCT CGATACGGCG AATATTTCAC GCCTTCTTCA TCTGATGAAG
CAGCATCTCG CTTCAGGCGG CATCATCGTT GCGGCCACCC ATCTCGATCT TGGCCTCCCA
TCGGCGGCGC GTCTGCATCT CGGCGCGGAG GTGGCGGCAT GA
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| Protein sequence | MTTSDFPAPA RLAARDLACL RGGRLVFEGL TFSVARGEAL VLTGANGAGK SSLLRQIAGL
LEIDHSAIAL EGGDSELTIG EQAHYVGHLD ALKPSMSVLE TLHFWKQYFG GADDAAVSAA
LEAFALTPLA DLPVGYLSAG QRRRVSLARM LVAPRPLWLL DEPTVALDTA NISRLLHLMK
QHLASGGIIV AATHLDLGLP SAARLHLGAE VAA
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