| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1398 |
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| Symbol | |
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| ID | 5456052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1529276 |
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| End bp | 1530010 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640876971 |
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| Product | cytochrome c-type biogenesis protein CcmB |
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| Protein accession | YP_001412675 |
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| Protein GI | 154251851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TCCTTGCCGT GTTCCGCCGC GAGCTGGGCG GCTATTTCGC GACGCCGCTC
GCTTTCATCT TCATCGTGAT CTTTCTCTTC ACGATGGGCG CCTTCACATT CTATCTCGGC
GGCTATTACG AGAGCGGGCA GGCGGATCTC ACGATCTTCT TCAACTTTCA TCCCTGGCTT
TATCTCTTTC TGCTGCCCGC TATCTCCATG CGCCTCTGGG CGGAAGAACG CCGCACAGGT
TCGATCGAGT TGCTGCTGTC GCTGCCTATT CCTCTCTGGG CGGCGGTGCT GGGAAAGTTT
CTTGCAGCAT GGGTCTTTTC GGGGATTGCA CTCGCGCTCA CCTTTCCGAT GTGGCTGACC
GTCAATTATC TCGGCGATCC GGATAATGGC GTGATTGTTG CGGGCTATCT CGGCAGCTTC
TTCATGGCGG GCGGCTATCT TGCCATCGGT TCGTGCCTCT CCGCCGTCAC GCGCAATCAG
GTTATCGCGT TCGTCGTCAG CGTCGCAGTT TGCTTCCTCT TCACGGTTTC CGGTCTTCCG
ATCGTGATTG ATTTCTTCTC GGGCTGGGCG CCGCAACAGG TTCTCAACAC GATTGCCTCG
TTCTCCTTCC TCACGCATTT CGATGCCATC AAGCGCGGCG TCATCGACCT TCGCGATGTA
ATCTATTTCG TCACGCTGAT CGGCACGTGG CTTATCGCCT GCGGGATCGT CGTCGACATG
AAGAAGGCCG GGTGA
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| Protein sequence | MNELLAVFRR ELGGYFATPL AFIFIVIFLF TMGAFTFYLG GYYESGQADL TIFFNFHPWL
YLFLLPAISM RLWAEERRTG SIELLLSLPI PLWAAVLGKF LAAWVFSGIA LALTFPMWLT
VNYLGDPDNG VIVAGYLGSF FMAGGYLAIG SCLSAVTRNQ VIAFVVSVAV CFLFTVSGLP
IVIDFFSGWA PQQVLNTIAS FSFLTHFDAI KRGVIDLRDV IYFVTLIGTW LIACGIVVDM
KKAG
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