Gene Plav_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1397 
Symbol 
ID5456704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1528308 
End bp1529279 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID640876970 
ProductABC transporter related 
Protein accessionYP_001412674 
Protein GI154251850 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA TCGACGGCCT CACCAAGCAA TTCGGTCCTT TCACCGCCGT CGACCGCATC 
AGCTTTTCGG TCGCACGCGG CGAAGTGCTC GGCTTTCTCG GCCCGAATGG CGCCGGCAAA
TCCACAACGA TGAAGATGAT CACCGGCTTT CTTGCGCCGA GTGCCGGCTC CGCGCGCGTC
TGCGGGCATG ATGTCGTCGC GTCCACCCTC GCCGCGCAGC GCCTGATCGG CTATCTGCCG
GAAGGTGCGC CTGCCTATGG CGACATGACG CCGCGCGGCT TCCTCACGTT TATCGCTCGC
GTACGCCGGC TTTCCGCCGC CGAAGCGGGT AAGGCCGTCG ACCGTGCTGT TGAAGCGACG
GAGCTTTCTT CCGTCCTCGA TCAGCCGATC GATACCTTGT CGAAGGGTTT CCGCCGCCGT
GTCGGCCTCG CGCAGTCGAT CCTTCACAAT CCGCCCGTTC TCATCATGGA CGAACCGACC
GACGGGCTCG ATCCCAATCA AAAATTCGAA GTACGCAAGC TGATCGGACG CATGGCCGCG
GAAAAGGCAA TCGTCATCTC GACGCATATC CTCGAAGAGG TCGATGCAAT CTGCACGCGC
GCACTCATCA TCGACCACGG GCAGATTGTT GCGGACGGGA CACCGGCGGC CCTCATGGCG
CGCTCGCGGT ATCACAATGC AGTGTCCCTC ACGCTTGGCG GGCAGACCAC GGTGGCGACG
GCGGAGAAAC TGCGCAGTCT TCCCGGTATT GCGAGCATTG AAGTCGCGCC ACGGGGCGAA
GAAACAACCT TCACGCTTTT CCCCGCGCAG GCGCGTGAGA GCGACACGCT GCTGGTCGAT
GCGGTGGCGC GGCTCGCGCG CGAGGAAAAC TGGCCGGTGC GCGCCCTTTA CGGCGAGCCT
GGCCGTCTCG ACGAGGTGTT CCGCAGCCTC ACCCGCTCCG ATGCAAGGCC AGAAGAAAAG
GACGCGGCAT GA
 
Protein sequence
MIVIDGLTKQ FGPFTAVDRI SFSVARGEVL GFLGPNGAGK STTMKMITGF LAPSAGSARV 
CGHDVVASTL AAQRLIGYLP EGAPAYGDMT PRGFLTFIAR VRRLSAAEAG KAVDRAVEAT
ELSSVLDQPI DTLSKGFRRR VGLAQSILHN PPVLIMDEPT DGLDPNQKFE VRKLIGRMAA
EKAIVISTHI LEEVDAICTR ALIIDHGQIV ADGTPAALMA RSRYHNAVSL TLGGQTTVAT
AEKLRSLPGI ASIEVAPRGE ETTFTLFPAQ ARESDTLLVD AVARLAREEN WPVRALYGEP
GRLDEVFRSL TRSDARPEEK DAA