Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1397 |
Symbol | |
ID | 5456704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1528308 |
End bp | 1529279 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876970 |
Product | ABC transporter related |
Protein accession | YP_001412674 |
Protein GI | 154251850 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCA TCGACGGCCT CACCAAGCAA TTCGGTCCTT TCACCGCCGT CGACCGCATC AGCTTTTCGG TCGCACGCGG CGAAGTGCTC GGCTTTCTCG GCCCGAATGG CGCCGGCAAA TCCACAACGA TGAAGATGAT CACCGGCTTT CTTGCGCCGA GTGCCGGCTC CGCGCGCGTC TGCGGGCATG ATGTCGTCGC GTCCACCCTC GCCGCGCAGC GCCTGATCGG CTATCTGCCG GAAGGTGCGC CTGCCTATGG CGACATGACG CCGCGCGGCT TCCTCACGTT TATCGCTCGC GTACGCCGGC TTTCCGCCGC CGAAGCGGGT AAGGCCGTCG ACCGTGCTGT TGAAGCGACG GAGCTTTCTT CCGTCCTCGA TCAGCCGATC GATACCTTGT CGAAGGGTTT CCGCCGCCGT GTCGGCCTCG CGCAGTCGAT CCTTCACAAT CCGCCCGTTC TCATCATGGA CGAACCGACC GACGGGCTCG ATCCCAATCA AAAATTCGAA GTACGCAAGC TGATCGGACG CATGGCCGCG GAAAAGGCAA TCGTCATCTC GACGCATATC CTCGAAGAGG TCGATGCAAT CTGCACGCGC GCACTCATCA TCGACCACGG GCAGATTGTT GCGGACGGGA CACCGGCGGC CCTCATGGCG CGCTCGCGGT ATCACAATGC AGTGTCCCTC ACGCTTGGCG GGCAGACCAC GGTGGCGACG GCGGAGAAAC TGCGCAGTCT TCCCGGTATT GCGAGCATTG AAGTCGCGCC ACGGGGCGAA GAAACAACCT TCACGCTTTT CCCCGCGCAG GCGCGTGAGA GCGACACGCT GCTGGTCGAT GCGGTGGCGC GGCTCGCGCG CGAGGAAAAC TGGCCGGTGC GCGCCCTTTA CGGCGAGCCT GGCCGTCTCG ACGAGGTGTT CCGCAGCCTC ACCCGCTCCG ATGCAAGGCC AGAAGAAAAG GACGCGGCAT GA
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Protein sequence | MIVIDGLTKQ FGPFTAVDRI SFSVARGEVL GFLGPNGAGK STTMKMITGF LAPSAGSARV CGHDVVASTL AAQRLIGYLP EGAPAYGDMT PRGFLTFIAR VRRLSAAEAG KAVDRAVEAT ELSSVLDQPI DTLSKGFRRR VGLAQSILHN PPVLIMDEPT DGLDPNQKFE VRKLIGRMAA EKAIVISTHI LEEVDAICTR ALIIDHGQIV ADGTPAALMA RSRYHNAVSL TLGGQTTVAT AEKLRSLPGI ASIEVAPRGE ETTFTLFPAQ ARESDTLLVD AVARLAREEN WPVRALYGEP GRLDEVFRSL TRSDARPEEK DAA
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