Gene Plav_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1396 
Symbol 
ID5456320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1527328 
End bp1527741 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID640876969 
Producthypothetical protein 
Protein accessionYP_001412673 
Protein GI154251849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GCGCCGATTA CGGTTCCCGC GCCGGTGAGG CTCCCTCCCG CCTCAGCCTC 
GTTCCCACGG ACCGAAAGAC CGATACGGCG GCGCAGAAGC GGCAGCGGGA GCCGGAGGTC
TTTTTCAATC GCAGCGAACT CGACGCCATT CTCTCCGTCT ACGGTCAAAA AGTGGCCGAT
GGCGAGTGGC GCGACTATGC GATGGGCGGC TTCAAGGATG TCGCGGTTTT CTCGGTATTC
AGGCGGACCA GCGAGATGCC GCTTTACCGC ATCGAAAAAC GGCCGAAGCT CGCGCGCAAG
CAGGGCGCCT ACAGCATCGT CGCGGCGACG GGGCTGGTGC TGAAGCGCGG CCATGAGTTG
CGGCAGGTGC TGAAGATTTT CGAGAAGCGC GCGCTACGGC TCATCGACGC CTGA
 
Protein sequence
MSDSADYGSR AGEAPSRLSL VPTDRKTDTA AQKRQREPEV FFNRSELDAI LSVYGQKVAD 
GEWRDYAMGG FKDVAVFSVF RRTSEMPLYR IEKRPKLARK QGAYSIVAAT GLVLKRGHEL
RQVLKIFEKR ALRLIDA