| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1394 |
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| Symbol | |
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| ID | 5456791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1523764 |
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| End bp | 1526340 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876967 |
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| Product | hypothetical protein |
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| Protein accession | YP_001412671 |
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| Protein GI | 154251847 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.472262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCA TGCGCATGAA ATCCGGTGAA GCCTCATTCG CGCTGGCCGC GCGTCTCGCC
CGGCGTGAGC TGCGTGGCGG GCTCAAGGGC TTTCGCGTTT TCATCGCCTG TCTCGCGCTT
GGCGTCGCAG CCATTGCGGG CGTCGGCTCG GTCTCGGCGG CGCTGACGCG CGGTCTCGCC
GAAGGCGGCC AGGAGATTCT CGGCGGCGAT ATCTCGATCC GCCTGATGCA TCGTCACGCA
ACGCCGGAAG AGCGCGCCTT CATCGAAGAG GGAAACCGCG TTTCCGTTTC CGCCGAAATG
CGGGCGATGG CGCGCAGCGC CGATGAAGCA GCCGCACGCA GCCAGACGCT GGTCGAGTTG
AAGGCCGTCG ACGGCGTCTA TCCCCTTTAC GGCGAGATGG AATTGTCGCC GGAAATGCCG
GTCGCGGACG CGCTCGCGAT CCGCGACGGC CGCCCCGGTC TCATCGTCGA ACCGAACCTC
CTGACGCGGC TCAATGTCGA GCCCGGAGAT CTCGTGCGCA TCGGCGATGC CGAGTTCGAG
CTTCGCGCCG CGATTGCGCG CGAGCCGGAC CGCGTGTCGG ATGGTTTCGC GCTCGGCCCC
CGCGCGATGA TCGCGGAGGA AGCCCTTCCC TCCACCGGCC TCGTGCAGCC GGGCAGCCTC
GTCAATTATC ATTACCGTGT GCGCCTGCCG GATAACGCGC GCAGCCCCGC CGATATCGCC
GCCTGGGTCG AAACGCTCAA TGAGCGGTTC CCGGATGCCG GCTGGCGCGT GCAGGACCGC
AGCGACAGCG CGCCCGGCGT GCGCCGCTTC GTCGAGCGCG TGGCGCTTTT TCTTTCGCTT
GTCGGTCTCA CCGCGCTTGT CGTCGGCGGC GTCGGCGTCG CCAATGCGGT GAAGTCCTAT
CTCGACGGCA AGCGCACCGT CATTGCCACC TTCAAATGTC TCGGCGCGCC GGGGCCGCTC
ATCTTCCGCC TCTATCTCAT GCAGGTGATG GCGCTTGCCG CTGTCGGCAT TCTCATCGGT
CTTGTCATTG GCGGTGCGGC GCCCTTCATC GTCGAGGCGG TGGCGGGCGA CATGATCCCC
ATTCCCGCCG ATCTCGGGCT TTACTGGGGG CCGCTGCTGC TTGCCGCCGC CTATGGCGTG
CTGACCGCGC TTGCCTTTGC GATCTGGCCG CTGGCGCGTG CGCGCGAAGT GCCGGCCACC
AGCCTCTTCC GCGATCTCAT CGCGCCGGCG CGCCGCTTCC CGCATCCCTT CTATGTCGCG
GCGACGGCGG GCGCGCTTCT GGCGCTTGCC GGGCTCGCGG TCGCGCTCGC GGAAGAACGT
CTCTTCGCGC TTTATTTCGT TGCCGCCGCC GCGGGCGTCT TCATACTTCT CTGGGGCGCG
GCGAACGGCA TCATGGCGCT GGCGGCGCGC AGCCCGCGGG TGCGTTCGGC GGAGCTTCGT
CTCGCGCTGG CCAATATCCA CCGCCCCGGC GCGCCGACGC CAGCCGTCGT GCTGTCGCTC
GGTCTCGGCC TCACGCTTCT CGTCACCATC TCCCTCATCA ACGGCAATCT CACCGGCGAA
ATTTCCGGCG AGCTGCCGGA CCGCGCGCCC GCCTTCTTCT TTGTCGACAT CCAGCCGGAT
CAGGTCGACG GGCTTGAGGC GCTGGTGACA GGCACGGAAG GCGTCACGGC TTTCAACCGC
GTGCCGATGC TTCGTGGGCG GATCGCCGCG GTGAACGGCG TGCCCTCGGA ACAGCTTACC
GTCGCCTCGG AAGCGCAATG GGCGCTGCGC GGCGATCGCG GCCTCACCTA TGCCGCCGAA
ATGCCTGACG GGTCGAAGCT GGTGCGCGGC TCGTGGTGGG CGGAGGATTA TGCGGGCCCG
CCGCTCGTCT CCTTCAGCGA GGAACTGGCG CAGGGCTTCG GCGTCGATAT CGGCGACACG
ATCACCGTCA ATGTGCTCGG CCGCGAAATA TCCGCGACGC TCGCCAATAC GCGCGAGATC
GACTGGTCGA GCCTCGGTAT CAATTTCGTT CTCGTCTTCT CGCCGGGCAT GTTGTCCTCG
GCGCCCCATA CCGTGCTCGC CACCGTCGAC ATGGAAGGCG GGCCCGCCGC CGAAGAGGCG
CTGGAGCGCG AGGTCACGGC GCAGTTTCCA AGCATCACCT CCGTCCGCGT CCGCGAGGCG
CTGGAGGCGG TGAACTCGCT TCTCGAGAAT TTCGCCATGG CCGTCCGCGC GACAGGCGGC
GTCACGCTCG CCGCCGGCAT TCTCGTCCTT GCCGGCGCCA TGGCGGCAGG CTTCCGCTCG
CGCGTCCGCG ATGCCGTCAT CCTCAAGGTC CTCGGCGCCA CGCGCGGCCG CATACTCGGC
ATCTATGTCC GCGAATATGC GGCGCTTGGT TTTGCCACCG CCCTCATCGC GGGCCTGGCG
GGGACAAGTG CCGCTTACGT GGTCGTCACC ATGGTCATGG AGATGCCCTG GCGCTTCCTT
CCGGGCACCG TCGCCCTCAC GGTTCTCGGG GCGACCCTCG TCACCGTCGC GCTGGGGCTC
CTCGGCACCT GGCGGGCGCT CTCCGTGCCC TCGGCCTCGG TCCTGCGGGC GGACTGA
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| Protein sequence | MGGMRMKSGE ASFALAARLA RRELRGGLKG FRVFIACLAL GVAAIAGVGS VSAALTRGLA
EGGQEILGGD ISIRLMHRHA TPEERAFIEE GNRVSVSAEM RAMARSADEA AARSQTLVEL
KAVDGVYPLY GEMELSPEMP VADALAIRDG RPGLIVEPNL LTRLNVEPGD LVRIGDAEFE
LRAAIAREPD RVSDGFALGP RAMIAEEALP STGLVQPGSL VNYHYRVRLP DNARSPADIA
AWVETLNERF PDAGWRVQDR SDSAPGVRRF VERVALFLSL VGLTALVVGG VGVANAVKSY
LDGKRTVIAT FKCLGAPGPL IFRLYLMQVM ALAAVGILIG LVIGGAAPFI VEAVAGDMIP
IPADLGLYWG PLLLAAAYGV LTALAFAIWP LARAREVPAT SLFRDLIAPA RRFPHPFYVA
ATAGALLALA GLAVALAEER LFALYFVAAA AGVFILLWGA ANGIMALAAR SPRVRSAELR
LALANIHRPG APTPAVVLSL GLGLTLLVTI SLINGNLTGE ISGELPDRAP AFFFVDIQPD
QVDGLEALVT GTEGVTAFNR VPMLRGRIAA VNGVPSEQLT VASEAQWALR GDRGLTYAAE
MPDGSKLVRG SWWAEDYAGP PLVSFSEELA QGFGVDIGDT ITVNVLGREI SATLANTREI
DWSSLGINFV LVFSPGMLSS APHTVLATVD MEGGPAAEEA LEREVTAQFP SITSVRVREA
LEAVNSLLEN FAMAVRATGG VTLAAGILVL AGAMAAGFRS RVRDAVILKV LGATRGRILG
IYVREYAALG FATALIAGLA GTSAAYVVVT MVMEMPWRFL PGTVALTVLG ATLVTVALGL
LGTWRALSVP SASVLRAD
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