| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1393 |
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| Symbol | |
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| ID | 5456347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1522833 |
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| End bp | 1523525 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876966 |
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| Product | ABC transporter related |
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| Protein accession | YP_001412670 |
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| Protein GI | 154251846 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTCAAA ACATAATCGA ACTTGCCAGC GTCAAGCTCA CCCTGCCGAG CGCGGCCGGG
CCGGTCAACA TCCTCCGCGG CATCGACCTC GCCATCGGCG CGGGCGAAGC CGCCGGTCTC
GTCGGGCCGT CCGGCTCCGG CAAATCCACC CTTCTCATGG TGCTTGCGGG GCTCGAGCGT
CCAAGCGAGG GCCGCATCGT CGCGGCAGGG GAAGATCTCA CAGGCCTTGG CGAGGATGCG
CTGGCGCGCT TCCGCCGCAA TCATATAGGC ATCGTCTTCC AGTCCTTCCA CCTCATCCCC
ACCATGACGG CGCTCGAGAA TGTCGCGATC CCGCTTGAGT TCGCGGGCCG GCAGGATGCT
TTCGCGCGCG CGGAGGAAGA GCTTCGCCTT GTCGGCCTCG GCCACAGGCT CACACATTAT
CCGGGTCAAT TGTCGGGCGG CGAACAGCAG CGCGTGGCGC TGGCGCGCGC GGTCGCGGGC
GATCCGGAAA TCCTTCTGGC GGACGAGCCG ACCGGCAATC TCGATCAGGC GACGGGACAC
GAGATCATCG AACTCATGTT CGATCTTCAT ACGCGCAAGG GAACGACGCT CGTCCTCATC
ACCCATGACG AAGAACTCGC CGCCCGCTGC GACCGCGTCA TCCGCCTGCG CGACGGACTG
GTCGAAAGCA TTGAAGCGGG AGCGGCGGCG TGA
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| Protein sequence | MPQNIIELAS VKLTLPSAAG PVNILRGIDL AIGAGEAAGL VGPSGSGKST LLMVLAGLER
PSEGRIVAAG EDLTGLGEDA LARFRRNHIG IVFQSFHLIP TMTALENVAI PLEFAGRQDA
FARAEEELRL VGLGHRLTHY PGQLSGGEQQ RVALARAVAG DPEILLADEP TGNLDQATGH
EIIELMFDLH TRKGTTLVLI THDEELAARC DRVIRLRDGL VESIEAGAAA
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